| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is serB [H]
Identifier: 221230403
GI number: 221230403
Start: 2083275
End: 2084510
Strand: Reverse
Name: serB [H]
Synonym: MLBr_01727
Alternate gene names: 221230403
Gene position: 2084510-2083275 (Counterclockwise)
Preceding gene: 221230404
Following gene: 221230402
Centisome position: 63.78
GC content: 63.19
Gene sequence:
>1236_bases GTGAATACGCCACCCAAGGTGTCGGTGCTGATCACTGTCACCGGCGTGGATCAGCCAGGTGTGACGTCAGCGCTCTTCGC GGTGCTTTCGCGGCACGGGGGCGAACTGCTCAACGTCGAGCAGGTGGTAATTCGGGGTCGGCTCACACTGGGTGTGCTGG TGTTGTGCCCGCCGGAAGTTGCCGCTTATACCGCGTTGCGAGATGACGTGCAAGCCGCGATTCGCCGGGTCGGCCTTGAT GTCACGATCGAGCGCAGTGACGACTTGCCGATCATCCGGGAACCGTCGACCCACACGATTTTTGTGCTGGGCCGTCCGAT TACCGCTCGGGCGTTCGGCGCTGTAGCACGTGAGGTTGCGGCACTGGATGTCAATATCGACGTCATTCGAGGCATCTCCG ACTACCCGGTTACCGGGCTGGAGTTGCGAGTCTCGGCGCCGTTGGAAGCCGCGGGATCGCTGCGGACAGCTCTCAACCGG GTGGCTACCGAGGAACATGTCGACGTGGCAGTGGAGGGTTACGGTCTGGCCCGGCGCATCAAACGCCTCATTGTGTTTGA CGTCGATTCCACTTTGGTCCAGGGTGAGGTGATTGAAATGCTGGCCGCCCGAGCTGGCGCCCAGGGAACGGTCGCCGCGA TCACCGAGGCCGCGATGCGCGGTGAACTGGATTTCGCGGAATCGTTGCAGCAGCGGGTGGCCACCTTGGCGGGACTGCCT GTCACGGTGGTCGATGAGGTGGCCAATCAGTTGCAGCTGATGCCAGGTGCTCGGACCACTCTGCGTACGCTGCGACGGCT GGGGTTTCGTTGCGGGGTGGTGTCCGGAGGCTTTCGGCGGATCATCGAGCCGCTTGCGCACGAGCTGATGCTGGACTTCG TCGCGGCCAATGAGTTAGAGATCGTCGACGGCATACTTACTGGCCGGGTGGTCGGCACAATCGTCGATCGGCCCGGTAAG GCCAAGGCGTTACGCTACTTCTCAGAGCAGGCTGGTGTGCCGATGGAGCAGACCGTTGCCGTCGGTGACGGCGCCAATGA CATCGACATGCTGACAGCGGCTGGGCTGGGAATTGCGTTTAACGCTAAGCCGGCGTTGCGTGCCGTCGCCGATGCGTCGT TGAGCCATCCCTACCTGGACACGGTGCTTTTTGTGTTGGGTGTGACACGCGGAGAGATCGAGGCCGCGGACGCGGCCGAC GGCGGGGTGCGCCGCGTCGAGATCCCTCCCGACTAG
Upstream 100 bases:
>100_bases CGACGAGGCATACGTTGGGCGCCGTCACGCCGAGGAGCTCGTTGAGGTGAGTTTACACTGATACGGCTCGGCTTGGCCGG CGCTGTCAGATGAGTCGCGA
Downstream 100 bases:
>100_bases CCGCTTCCCGTGGCGACTTGGTCGAGGCTACCCGGCAACCGTCGCAGCATCGCGGTACGGCACGATGTCCGAGTGTCCCA ACTTGGCCCTGAAACTGGCA
Product: putative phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MNTPPKVSVLITVTGVDQPGVTSALFAVLSRHGGELLNVEQVVIRGRLTLGVLVLCPPEVAAYTALRDDVQAAIRRVGLD VTIERSDDLPIIREPSTHTIFVLGRPITARAFGAVAREVAALDVNIDVIRGISDYPVTGLELRVSAPLEAAGSLRTALNR VATEEHVDVAVEGYGLARRIKRLIVFDVDSTLVQGEVIEMLAARAGAQGTVAAITEAAMRGELDFAESLQQRVATLAGLP VTVVDEVANQLQLMPGARTTLRTLRRLGFRCGVVSGGFRRIIEPLAHELMLDFVAANELEIVDGILTGRVVGTIVDRPGK AKALRYFSEQAGVPMEQTVAVGDGANDIDMLTAAGLGIAFNAKPALRAVADASLSHPYLDTVLFVLGVTRGEIEAADAAD GGVRRVEIPPD
Sequences:
>Translated_411_residues MNTPPKVSVLITVTGVDQPGVTSALFAVLSRHGGELLNVEQVVIRGRLTLGVLVLCPPEVAAYTALRDDVQAAIRRVGLD VTIERSDDLPIIREPSTHTIFVLGRPITARAFGAVAREVAALDVNIDVIRGISDYPVTGLELRVSAPLEAAGSLRTALNR VATEEHVDVAVEGYGLARRIKRLIVFDVDSTLVQGEVIEMLAARAGAQGTVAAITEAAMRGELDFAESLQQRVATLAGLP VTVVDEVANQLQLMPGARTTLRTLRRLGFRCGVVSGGFRRIIEPLAHELMLDFVAANELEIVDGILTGRVVGTIVDRPGK AKALRYFSEQAGVPMEQTVAVGDGANDIDMLTAAGLGIAFNAKPALRAVADASLSHPYLDTVLFVLGVTRGEIEAADAAD GGVRRVEIPPD >Mature_411_residues MNTPPKVSVLITVTGVDQPGVTSALFAVLSRHGGELLNVEQVVIRGRLTLGVLVLCPPEVAAYTALRDDVQAAIRRVGLD VTIERSDDLPIIREPSTHTIFVLGRPITARAFGAVAREVAALDVNIDVIRGISDYPVTGLELRVSAPLEAAGSLRTALNR VATEEHVDVAVEGYGLARRIKRLIVFDVDSTLVQGEVIEMLAARAGAQGTVAAITEAAMRGELDFAESLQQRVATLAGLP VTVVDEVANQLQLMPGARTTLRTLRRLGFRCGVVSGGFRRIIEPLAHELMLDFVAANELEIVDGILTGRVVGTIVDRPGK AKALRYFSEQAGVPMEQTVAVGDGANDIDMLTAAGLGIAFNAKPALRAVADASLSHPYLDTVLFVLGVTRGEIEAADAAD GGVRRVEIPPD
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=196, Percent_Identity=29.5918367346939, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1790849, Length=236, Percent_Identity=45.7627118644068, Blast_Score=185, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6321647, Length=300, Percent_Identity=36.3333333333333, Blast_Score=178, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 43563; Mature: 43563
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPPKVSVLITVTGVDQPGVTSALFAVLSRHGGELLNVEQVVIRGRLTLGVLVLCPPEV CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEECHHHHHHHCCCEEEEEEECCCHH AAYTALRDDVQAAIRRVGLDVTIERSDDLPIIREPSTHTIFVLGRPITARAFGAVAREVA HHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHH ALDVNIDVIRGISDYPVTGLELRVSAPLEAAGSLRTALNRVATEEHVDVAVEGYGLARRI HEECCHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHCEEEEECCHHHHHH KRLIVFDVDSTLVQGEVIEMLAARAGAQGTVAAITEAAMRGELDFAESLQQRVATLAGLP HHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC VTVVDEVANQLQLMPGARTTLRTLRRLGFRCGVVSGGFRRIIEPLAHELMLDFVAANELE HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHH IVDGILTGRVVGTIVDRPGKAKALRYFSEQAGVPMEQTVAVGDGANDIDMLTAAGLGIAF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCCEEE NAKPALRAVADASLSHPYLDTVLFVLGVTRGEIEAADAADGGVRRVEIPPD CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MNTPPKVSVLITVTGVDQPGVTSALFAVLSRHGGELLNVEQVVIRGRLTLGVLVLCPPEV CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEECHHHHHHHCCCEEEEEEECCCHH AAYTALRDDVQAAIRRVGLDVTIERSDDLPIIREPSTHTIFVLGRPITARAFGAVAREVA HHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHH ALDVNIDVIRGISDYPVTGLELRVSAPLEAAGSLRTALNRVATEEHVDVAVEGYGLARRI HEECCHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHCEEEEECCHHHHHH KRLIVFDVDSTLVQGEVIEMLAARAGAQGTVAAITEAAMRGELDFAESLQQRVATLAGLP HHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC VTVVDEVANQLQLMPGARTTLRTLRRLGFRCGVVSGGFRRIIEPLAHELMLDFVAANELE HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHH IVDGILTGRVVGTIVDRPGKAKALRYFSEQAGVPMEQTVAVGDGANDIDMLTAAGLGIAF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCCEEE NAKPALRAVADASLSHPYLDTVLFVLGVTRGEIEAADAADGGVRRVEIPPD CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA