| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is aroE [H]
Identifier: 221229655
GI number: 221229655
Start: 626685
End: 627521
Strand: Direct
Name: aroE [H]
Synonym: MLBr_00515
Alternate gene names: 221229655
Gene position: 626685-627521 (Clockwise)
Preceding gene: 221229654
Following gene: 221229656
Centisome position: 19.18
GC content: 63.8
Gene sequence:
>837_bases GTGTCCTTGACAGCGTGCGCTAACAAGGGGCCGCGAAAAGCTGGAATTATTGGTTCTCCAATCGCGCATTCCCGTTCCCC GCACTTGCACCTGGCCGCTTACCGTGCACTGCGTCTCCACGACTGGACGTATGAGCGGATCGAATGCGATGCTGAAGAGC TCCCGACTGTCGTTAGCGGGTTCGGGCCGCAGTGGGTCGGCGTTTCAGTGACCATGCCGGGCAAATTCGCCGCGCTGCGG TTCGCCGATGAGCACACTGCACGTGCCAGCCTGGTTGGGTCGGCTAACACGCTGCTGCGGACCCAGCGCGGCTGGCGGGC CGACAACACCGACATTGATGGTGTGGCGGGGGCGCTGGCGGCGATCGGGCCTTTGGCAGGGCGTGCGCTAGTGTGCGGGT CGGGCGGCACTGCTCCGGCGGCTGTGATGGGGTTGGCTGAACTGGGCGTCACCGATATCACCGTTTTGGCACGCAATCCC GACAAGGCGTCCCGGTTGGTCGATCTCGGGGTTCAGGTCGGTGTGGCGACCCGATTGTGCGGTCTGGACAGCGGTGGCTT GGCAGATGAGGTGAAGGCTGCCGAAGTGCTGGTTAGTACGGTACCGGCAGATGTGGCTGCGCGGTATGTCGATGTCTTCG CGACGGTCCCGGTGCTGCTAGATGCAATCTACGACCCGTGGCCTACGCCACTGGTCGCAGCGGTGTCCGCGGCGGGCGGC CGAGTGATCAGCGGCTTGCAAATGCTGTTGCATCAAGCGTTTGCGCAGGTGGAGCAATTCACCGGGATGCCTGCACCGCG AGAGGCGATGGCTTGTGCTCTGGCGGGTTTGCATTAG
Upstream 100 bases:
>100_bases GACTGGCTGTACTTCGTCACCGTTGATACCCAGGGGACAACTCTGTTCACCAGGGATTATCAGCAGCATTTAACCAATAT CGAACTCGCGAAGCACAACG
Downstream 100 bases:
>100_bases CGTGCCGCGTATGCAGGATAGGGGCCGTTTGTGTGATGCTGATCTGGTTGGCCGGTACTGAGTTTATGACATCAATGTCC CTGGCCACCATGAGCCTGGC
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSLTACANKGPRKAGIIGSPIAHSRSPHLHLAAYRALRLHDWTYERIECDAEELPTVVSGFGPQWVGVSVTMPGKFAALR FADEHTARASLVGSANTLLRTQRGWRADNTDIDGVAGALAAIGPLAGRALVCGSGGTAPAAVMGLAELGVTDITVLARNP DKASRLVDLGVQVGVATRLCGLDSGGLADEVKAAEVLVSTVPADVAARYVDVFATVPVLLDAIYDPWPTPLVAAVSAAGG RVISGLQMLLHQAFAQVEQFTGMPAPREAMACALAGLH
Sequences:
>Translated_278_residues MSLTACANKGPRKAGIIGSPIAHSRSPHLHLAAYRALRLHDWTYERIECDAEELPTVVSGFGPQWVGVSVTMPGKFAALR FADEHTARASLVGSANTLLRTQRGWRADNTDIDGVAGALAAIGPLAGRALVCGSGGTAPAAVMGLAELGVTDITVLARNP DKASRLVDLGVQVGVATRLCGLDSGGLADEVKAAEVLVSTVPADVAARYVDVFATVPVLLDAIYDPWPTPLVAAVSAAGG RVISGLQMLLHQAFAQVEQFTGMPAPREAMACALAGLH >Mature_277_residues SLTACANKGPRKAGIIGSPIAHSRSPHLHLAAYRALRLHDWTYERIECDAEELPTVVSGFGPQWVGVSVTMPGKFAALRF ADEHTARASLVGSANTLLRTQRGWRADNTDIDGVAGALAAIGPLAGRALVCGSGGTAPAAVMGLAELGVTDITVLARNPD KASRLVDLGVQVGVATRLCGLDSGGLADEVKAAEVLVSTVPADVAARYVDVFATVPVLLDAIYDPWPTPLVAAVSAAGGR VISGLQMLLHQAFAQVEQFTGMPAPREAMACALAGLH
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=270, Percent_Identity=29.2592592592593, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789675, Length=249, Percent_Identity=28.9156626506024, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320332, Length=283, Percent_Identity=31.8021201413428, Blast_Score=113, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 28746; Mature: 28615
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTACANKGPRKAGIIGSPIAHSRSPHLHLAAYRALRLHDWTYERIECDAEELPTVVSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHCCCHHHCCHHHHC FGPQWVGVSVTMPGKFAALRFADEHTARASLVGSANTLLRTQRGWRADNTDIDGVAGALA CCCCEEEEEEECCCCEEEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHH AIGPLAGRALVCGSGGTAPAAVMGLAELGVTDITVLARNPDKASRLVDLGVQVGVATRLC HHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH GLDSGGLADEVKAAEVLVSTVPADVAARYVDVFATVPVLLDAIYDPWPTPLVAAVSAAGG CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC RVISGLQMLLHQAFAQVEQFTGMPAPREAMACALAGLH HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SLTACANKGPRKAGIIGSPIAHSRSPHLHLAAYRALRLHDWTYERIECDAEELPTVVSG CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHCCCHHHCCHHHHC FGPQWVGVSVTMPGKFAALRFADEHTARASLVGSANTLLRTQRGWRADNTDIDGVAGALA CCCCEEEEEEECCCCEEEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHH AIGPLAGRALVCGSGGTAPAAVMGLAELGVTDITVLARNPDKASRLVDLGVQVGVATRLC HHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH GLDSGGLADEVKAAEVLVSTVPADVAARYVDVFATVPVLLDAIYDPWPTPLVAAVSAAGG CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC RVISGLQMLLHQAFAQVEQFTGMPAPREAMACALAGLH HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA