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The map label for this gene is yajC

Identifier: 221229641

GI number: 221229641

Start: 589661

End: 590005

Strand: Direct

Name: yajC

Synonym: MLBr_00486

Alternate gene names: NA

Gene position: 589661-590005 (Clockwise)

Preceding gene: 221229638

Following gene: 221229642

Centisome position: 18.04

GC content: 55.36

Gene sequence:

>345_bases
ATGGAGAGTTTGGTTTTACTCTTACTGTTCCTGCTCATCATGGGTGGGTTCATGTTTTTCGCGTCGCGGCGTCAAAGACG
CTCGATGCAAGCCACGATCGACCTGTACAACTCGCTACAGCCAGGCGACCGAGTGAATACCACCTCCGGCCTGCAGGCCA
CCATCATTGTCGTCGGGGACGATACCGTCGATCTTGAGATTGCGCCAGGCGTCGTAACTACTTGGATGAAGCTGGCGATT
CGTGATCGGATTCTCCCGGACGATGCGTATATGGACGAACACGAGGCCGAACCGGGGGATTTCGTGTACTGCGATGAGCT
AGAAGAGTCCGACGGCTCCAGCTAA

Upstream 100 bases:

>100_bases
TGAACGGTTATTTTGGTGCGCGTCCGCCGGTCAGCTGGCCAGCGTTGCGCCCAGTACCAAATAAAAAATACATACAAAAT
ACAGGTGGGTTGATGGGTCG

Downstream 100 bases:

>100_bases
CGTCGAGGAACGAGTGATGAGGGATTCCTGACGGCGCTTGTGTCTTGTGTGAAGGGCCTAGTGATGCGACACGTAGGCTC
TGTCGGGAAAAACCGATTTC

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MESLVLLLLFLLIMGGFMFFASRRQRRSMQATIDLYNSLQPGDRVNTTSGLQATIIVVGDDTVDLEIAPGVVTTWMKLAI
RDRILPDDAYMDEHEAEPGDFVYCDELEESDGSS

Sequences:

>Translated_114_residues
MESLVLLLLFLLIMGGFMFFASRRQRRSMQATIDLYNSLQPGDRVNTTSGLQATIIVVGDDTVDLEIAPGVVTTWMKLAI
RDRILPDDAYMDEHEAEPGDFVYCDELEESDGSS
>Mature_114_residues
MESLVLLLLFLLIMGGFMFFASRRQRRSMQATIDLYNSLQPGDRVNTTSGLQATIIVVGDDTVDLEIAPGVVTTWMKLAI
RDRILPDDAYMDEHEAEPGDFVYCDELEESDGSS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Secreted (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2588c

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y486_MYCLE (Q49647)

Other databases:

- EMBL:   U00011
- EMBL:   AL023591
- EMBL:   AL583918
- PIR:   F86969
- PIR:   S72735
- RefSeq:   NP_301426.1
- EnsemblBacteria:   EBMYCT00000028058
- GeneID:   909239
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML0486
- NMPDR:   fig|272631.1.peg.298
- Leproma:   ML0486
- GeneTree:   EBGT00050000016474
- HOGENOM:   HBG129050
- OMA:   TIDLHNS
- ProtClustDB:   PRK05886
- BioCyc:   MLEP272631:ML0486-MONOMER
- InterPro:   IPR003849
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 12750; Mature: 12750

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLVLLLLFLLIMGGFMFFASRRQRRSMQATIDLYNSLQPGDRVNTTSGLQATIIVVGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
DTVDLEIAPGVVTTWMKLAIRDRILPDDAYMDEHEAEPGDFVYCDELEESDGSS
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MESLVLLLLFLLIMGGFMFFASRRQRRSMQATIDLYNSLQPGDRVNTTSGLQATIIVVGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
DTVDLEIAPGVVTTWMKLAIRDRILPDDAYMDEHEAEPGDFVYCDELEESDGSS
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002