Click here to switch to the map view.

The map label for this gene is lsr2 [H]

Identifier: 221229509

GI number: 221229509

Start: 305383

End: 305721

Strand: Direct

Name: lsr2 [H]

Synonym: MLBr_00234

Alternate gene names: 221229509

Gene position: 305383-305721 (Clockwise)

Preceding gene: 221229508

Following gene: 221229510

Centisome position: 9.34

GC content: 61.95

Gene sequence:

>339_bases
ATGGCGAAGAAAGTGACCGTCACCTTGGTCGATGATTTCGATGGTGCGGGCGCCGCCGATGAAACGGTCGAATTCGGGCT
TGACGGGGTGACCTACGAGATCGACCTTACGAACAAGAATGCCGCGAAACTGCGTGGCGATCTGAGGCAATGGGTGTCCG
CCGGACGGCGCGTCGGCGGTCGGCGGCGAGGGCGTTCCAATTCTGGACGCGGCCGTGGGGCGATCGATCGCGAACAGAGC
GCGGCGATCCGGGAATGGGCTCGTCGGAACGGACATAATGTGTCGACTCGTGGTCGTATTCCGGCCGACGTCATTGACGC
ATTCCACGCGGCGACTTAA

Upstream 100 bases:

>100_bases
TTCGTGTTGTGTCGAGATTGAGTATGCGGTGTTCTTATGGCAGATTAGTATCTGGGGAGGTTGATCCAAACTGCTCAGGA
AGAAACGTGAGGGTAAGATA

Downstream 100 bases:

>100_bases
AATAAAAAGTTCTGTACTGACGCCCGGGCTCTAGGACCCGGGCGTCAGTACTTTAAAAAAATATGTTGCTTTCGTTGCTG
GCGAACTGATCGCCAGCAAC

Product: lsr2 protein (15 kDa antigen)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAKKVTVTLVDDFDGAGAADETVEFGLDGVTYEIDLTNKNAAKLRGDLRQWVSAGRRVGGRRRGRSNSGRGRGAIDREQS
AAIREWARRNGHNVSTRGRIPADVIDAFHAAT

Sequences:

>Translated_112_residues
MAKKVTVTLVDDFDGAGAADETVEFGLDGVTYEIDLTNKNAAKLRGDLRQWVSAGRRVGGRRRGRSNSGRGRGAIDREQS
AAIREWARRNGHNVSTRGRIPADVIDAFHAAT
>Mature_111_residues
AKKVTVTLVDDFDGAGAADETVEFGLDGVTYEIDLTNKNAAKLRGDLRQWVSAGRRVGGRRRGRSNSGRGRGAIDREQSA
AIREWARRNGHNVSTRGRIPADVIDAFHAAT

Specific function: Dominant T-cell antigen and stimulates lymphoproliferation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12165; Mature: 12033

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKVTVTLVDDFDGAGAADETVEFGLDGVTYEIDLTNKNAAKLRGDLRQWVSAGRRVGG
CCCEEEEEEEECCCCCCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
RRRGRSNSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAFHAAT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AKKVTVTLVDDFDGAGAADETVEFGLDGVTYEIDLTNKNAAKLRGDLRQWVSAGRRVGG
CCEEEEEEEECCCCCCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
RRRGRSNSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAFHAAT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]