| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220933153
Identifier: 220933153
GI number: 220933153
Start: 2539309
End: 2540427
Strand: Reverse
Name: 220933153
Synonym: Hore_23210
Alternate gene names: NA
Gene position: 2540427-2539309 (Counterclockwise)
Preceding gene: 220933154
Following gene: 220933152
Centisome position: 98.54
GC content: 42.72
Gene sequence:
>1119_bases ATGGAACTTTCTGGAGCTATAACAGAAAAAAGGAGGGAAAAAAAGATGAAAAGAAGTTTTAAGTACTTAGTACCGATTAT AATCAGTGTGTTTTTGCTTTCACTACCGGTTGCCGCTGAAGTTAAATTCGGAGGGGAGGTTAAAACCGGTTTTACAGCAA CTTCTGTAGAGAACAGCGGGTTTTATTATGATTTATATGAACAGTTAAAACTTGAGATATTCGTCCCTGAAACCGGGAAT ACGGAGGCCAGGATTGAGGCTGATTTCACGGTTCCTGGAGGTCCTGGCTTTAAAAAATTATACCTGAAACACCGCTTTAA GGAGATGGATTTAACCATCGGCCGCCAGCCTGTGTCCTGGTCCTTCGGCTCCCTGGTAAATCCGGTTGATTACAGCCTCG GTGCTGAGGCCATGAATGAAGAGGGGAGTGCAAAATATGTAGATGGTATTGAGGCCTTTATCCCCTTAAACTGGAATTCC AATATCTCACTGGTATCTTCTTTCCCGGGTACATCCTTTGATTCTGACCGGGTAAAATTTGGACTGAGGGGCAGGACCCT TATCAACAATAATTTTGATGTTTCAGCCAATTATGTTCAGGATCAGTATAAGGATACTTTTGATACAATTATAGACCGAC GTTTTGGGGTCACTGTTAAAGGAGACCTTGATCCCCTGGGAATTTACGGGGCCTTCGGTTATTACAGTGATGATAATGGA GAATCTGACCTGGCCTATCTGGCCGGCTGTGATTATAGTTTTTTAAGAAATAATAATAATCGCGTGTACCTTCAGGGGGA AGTCCTGAGGGTTAAAAAACAGAGGGTCAGTGATATGCTCCATGAAATGCCCCTTAATATTTCGAATGCCGATGAAGAAT TAACCCTGTTATTCGGTAATGCCAGTTATGGTATCAATCAATTCTCTGAAGCGGGTTTAATGACTGCCTACTGCCTCAAC GATGGTGGTCTGGCTCTGATGCCCCGTTATCAGAACCAGCTGGGTAGTAATCTGACCATGGAACTCAAAGGGTTATTTAC CCTGGCTTCAGACCAGGCCCTCTTCTATAGTGATTTTTATAACAGTGTAGTTGGTGTTGAATTAAGCTATCCTTTCTAA
Upstream 100 bases:
>100_bases AATTCTATGGATAATATTTATAGGTAAGGAATAATAATTAATTCCAGGAAGTTATTTATTTTCAAGGCAGTTAATTTGTG TATTTTAAGGTGGTTTATTC
Downstream 100 bases:
>100_bases ACACCACTTAGGCTTTTTAAGCTATAAAAAGGATCAATCATTATTAATAATTTTAATAGTTTTTTACATACCCCGGTGAA AACCGGGGTATTAATCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MELSGAITEKRREKKMKRSFKYLVPIIISVFLLSLPVAAEVKFGGEVKTGFTATSVENSGFYYDLYEQLKLEIFVPETGN TEARIEADFTVPGGPGFKKLYLKHRFKEMDLTIGRQPVSWSFGSLVNPVDYSLGAEAMNEEGSAKYVDGIEAFIPLNWNS NISLVSSFPGTSFDSDRVKFGLRGRTLINNNFDVSANYVQDQYKDTFDTIIDRRFGVTVKGDLDPLGIYGAFGYYSDDNG ESDLAYLAGCDYSFLRNNNNRVYLQGEVLRVKKQRVSDMLHEMPLNISNADEELTLLFGNASYGINQFSEAGLMTAYCLN DGGLALMPRYQNQLGSNLTMELKGLFTLASDQALFYSDFYNSVVGVELSYPF
Sequences:
>Translated_372_residues MELSGAITEKRREKKMKRSFKYLVPIIISVFLLSLPVAAEVKFGGEVKTGFTATSVENSGFYYDLYEQLKLEIFVPETGN TEARIEADFTVPGGPGFKKLYLKHRFKEMDLTIGRQPVSWSFGSLVNPVDYSLGAEAMNEEGSAKYVDGIEAFIPLNWNS NISLVSSFPGTSFDSDRVKFGLRGRTLINNNFDVSANYVQDQYKDTFDTIIDRRFGVTVKGDLDPLGIYGAFGYYSDDNG ESDLAYLAGCDYSFLRNNNNRVYLQGEVLRVKKQRVSDMLHEMPLNISNADEELTLLFGNASYGINQFSEAGLMTAYCLN DGGLALMPRYQNQLGSNLTMELKGLFTLASDQALFYSDFYNSVVGVELSYPF >Mature_372_residues MELSGAITEKRREKKMKRSFKYLVPIIISVFLLSLPVAAEVKFGGEVKTGFTATSVENSGFYYDLYEQLKLEIFVPETGN TEARIEADFTVPGGPGFKKLYLKHRFKEMDLTIGRQPVSWSFGSLVNPVDYSLGAEAMNEEGSAKYVDGIEAFIPLNWNS NISLVSSFPGTSFDSDRVKFGLRGRTLINNNFDVSANYVQDQYKDTFDTIIDRRFGVTVKGDLDPLGIYGAFGYYSDDNG ESDLAYLAGCDYSFLRNNNNRVYLQGEVLRVKKQRVSDMLHEMPLNISNADEELTLLFGNASYGINQFSEAGLMTAYCLN DGGLALMPRYQNQLGSNLTMELKGLFTLASDQALFYSDFYNSVVGVELSYPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41642; Mature: 41642
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSGAITEKRREKKMKRSFKYLVPIIISVFLLSLPVAAEVKFGGEVKTGFTATSVENSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCEEEEEECCCC FYYDLYEQLKLEIFVPETGNTEARIEADFTVPGGPGFKKLYLKHRFKEMDLTIGRQPVSW EEEEEECCEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCCCC SFGSLVNPVDYSLGAEAMNEEGSAKYVDGIEAFIPLNWNSNISLVSSFPGTSFDSDRVKF CHHCCCCCCCCCCCHHHHCCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCEEE GLRGRTLINNNFDVSANYVQDQYKDTFDTIIDRRFGVTVKGDLDPLGIYGAFGYYSDDNG ECCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCEECCCCC ESDLAYLAGCDYSFLRNNNNRVYLQGEVLRVKKQRVSDMLHEMPLNISNADEELTLLFGN CCCEEEEECCCCHHEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC ASYGINQFSEAGLMTAYCLNDGGLALMPRYQNQLGSNLTMELKGLFTLASDQALFYSDFY CCCCCCHHHCCCCEEEEEECCCCEEEEEHHHHHCCCCEEEEEEEEEEEECCCEEEHHHHH NSVVGVELSYPF CCEEEEEEECCC >Mature Secondary Structure MELSGAITEKRREKKMKRSFKYLVPIIISVFLLSLPVAAEVKFGGEVKTGFTATSVENSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCEEEEEECCCC FYYDLYEQLKLEIFVPETGNTEARIEADFTVPGGPGFKKLYLKHRFKEMDLTIGRQPVSW EEEEEECCEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCCCC SFGSLVNPVDYSLGAEAMNEEGSAKYVDGIEAFIPLNWNSNISLVSSFPGTSFDSDRVKF CHHCCCCCCCCCCCHHHHCCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCEEE GLRGRTLINNNFDVSANYVQDQYKDTFDTIIDRRFGVTVKGDLDPLGIYGAFGYYSDDNG ECCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCEECCCCC ESDLAYLAGCDYSFLRNNNNRVYLQGEVLRVKKQRVSDMLHEMPLNISNADEELTLLFGN CCCEEEEECCCCHHEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC ASYGINQFSEAGLMTAYCLNDGGLALMPRYQNQLGSNLTMELKGLFTLASDQALFYSDFY CCCCCCHHHCCCCEEEEEECCCCEEEEEHHHHHCCCCEEEEEEEEEEEECCCEEEHHHHH NSVVGVELSYPF CCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA