Click here to switch to the map view.

The map label for this gene is 220933154

Identifier: 220933154

GI number: 220933154

Start: 2540846

End: 2541592

Strand: Reverse

Name: 220933154

Synonym: Hore_23220

Alternate gene names: NA

Gene position: 2541592-2540846 (Counterclockwise)

Preceding gene: 220933155

Following gene: 220933153

Centisome position: 98.58

GC content: 39.09

Gene sequence:

>747_bases
ATGTTTAATAAAACTACTAGAATACTATTACTGATAATGACAATGACTGTTGTGTTTTCTAGCCTGTCTATAGCCATAAC
ACCTGAAGAGATTATAAACAGGCGGGATGATAATGAATATGTCCGGTCAGCTAAAATTGAGTCTGAAATGATAATTATTA
AAGGTAACAGGAAGATTATTAAAACCATGGTCTCAATAACAGATGGGAAAAATGCCCTGGTGGAGTTTATTAATCCCCTC
GACAGGGGGACTAAATTTTTGAAGAGGGATGACAACCTCTTTATGTTCTTCCCCGACGCCGAGGACATTGTAAAGATATC
GGGCCATATGCTGGAACAGGGTATTATGGGGAGTGATCTCTCCTATAAGGATATTATGGAATCAGACAAATTAACCGAAC
TTTATGATTTTAAAATATTGAGAGAAGAGGAATATCAGGGGCGCCCCTGTTATGTAATGGAAGGTATAGCCCGGGAAGGG
GCCGAGGTTTCCTATTACAGGAGGGTAGCCTGGATAGATAAAGAGCGTTTTATTGGCCTTAAGGAAGAGCTATATGCCCG
GAGTGGCCGGTTATTAAAGGTTATGAAGGTTGATAAGGTTGAAGAGATTGAGGGGCGGTACTATCCGACTGAGTATATTA
CTGAAGATAAACTAATAAAAAACTCACGGACCATCTTCAGGGTTAAATCAATTAATTTTAATCCCGAAATACCGGAAAAC
ACCTTTACTCTGCAAAATTTAAACTGA

Upstream 100 bases:

>100_bases
CCGGCCAGGAGGGCAGCCCGTCTTAAGCCAACTGAAGCCCTGCGTGAAATATAGTACACCGGTGAGAGAAGAAAAATTTA
ATTTTAAGGGGGTAAAGGAA

Downstream 100 bases:

>100_bases
GGACTTTGTATAATGTTTTGCCAAATTAATTATTCAAAATAATTCCTGAGTAAAAATTGTTAACCAGGCCCCGGTTTCAG
CCGGGGTCTGGTGATTATAA

Product: putative sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFNKTTRILLLIMTMTVVFSSLSIAITPEEIINRRDDNEYVRSAKIESEMIIIKGNRKIIKTMVSITDGKNALVEFINPL
DRGTKFLKRDDNLFMFFPDAEDIVKISGHMLEQGIMGSDLSYKDIMESDKLTELYDFKILREEEYQGRPCYVMEGIAREG
AEVSYYRRVAWIDKERFIGLKEELYARSGRLLKVMKVDKVEEIEGRYYPTEYITEDKLIKNSRTIFRVKSINFNPEIPEN
TFTLQNLN

Sequences:

>Translated_248_residues
MFNKTTRILLLIMTMTVVFSSLSIAITPEEIINRRDDNEYVRSAKIESEMIIIKGNRKIIKTMVSITDGKNALVEFINPL
DRGTKFLKRDDNLFMFFPDAEDIVKISGHMLEQGIMGSDLSYKDIMESDKLTELYDFKILREEEYQGRPCYVMEGIAREG
AEVSYYRRVAWIDKERFIGLKEELYARSGRLLKVMKVDKVEEIEGRYYPTEYITEDKLIKNSRTIFRVKSINFNPEIPEN
TFTLQNLN
>Mature_248_residues
MFNKTTRILLLIMTMTVVFSSLSIAITPEEIINRRDDNEYVRSAKIESEMIIIKGNRKIIKTMVSITDGKNALVEFINPL
DRGTKFLKRDDNLFMFFPDAEDIVKISGHMLEQGIMGSDLSYKDIMESDKLTELYDFKILREEEYQGRPCYVMEGIAREG
AEVSYYRRVAWIDKERFIGLKEELYARSGRLLKVMKVDKVEEIEGRYYPTEYITEDKLIKNSRTIFRVKSINFNPEIPEN
TFTLQNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29063; Mature: 29063

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKTTRILLLIMTMTVVFSSLSIAITPEEIINRRDDNEYVRSAKIESEMIIIKGNRKII
CCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCHHHHHHHCCCCEEEEEECCHHHH
KTMVSITDGKNALVEFINPLDRGTKFLKRDDNLFMFFPDAEDIVKISGHMLEQGIMGSDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCC
SYKDIMESDKLTELYDFKILREEEYQGRPCYVMEGIAREGAEVSYYRRVAWIDKERFIGL
CHHHHHCCCCHHHHHHEEEEECCCCCCCCCCEEHHHHHCCCCHHHHHHHHEECHHHHCCH
KEELYARSGRLLKVMKVDKVEEIEGRYYPTEYITEDKLIKNSRTIFRVKSINFNPEIPEN
HHHHHHCCCCEEEEEECCCHHHHCCCCCCHHHCCCHHHHCCCCEEEEEEECCCCCCCCCC
TFTLQNLN
EEEEECCC
>Mature Secondary Structure
MFNKTTRILLLIMTMTVVFSSLSIAITPEEIINRRDDNEYVRSAKIESEMIIIKGNRKII
CCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCHHHHHHHCCCCEEEEEECCHHHH
KTMVSITDGKNALVEFINPLDRGTKFLKRDDNLFMFFPDAEDIVKISGHMLEQGIMGSDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCC
SYKDIMESDKLTELYDFKILREEEYQGRPCYVMEGIAREGAEVSYYRRVAWIDKERFIGL
CHHHHHCCCCHHHHHHEEEEECCCCCCCCCCEEHHHHHCCCCHHHHHHHHEECHHHHCCH
KEELYARSGRLLKVMKVDKVEEIEGRYYPTEYITEDKLIKNSRTIFRVKSINFNPEIPEN
HHHHHHCCCCEEEEEECCCHHHHCCCCCCHHHCCCHHHHCCCCEEEEEEECCCCCCCCCC
TFTLQNLN
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]