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The map label for this gene is ycbC [C]

Identifier: 220933067

GI number: 220933067

Start: 2435160

End: 2435930

Strand: Reverse

Name: ycbC [C]

Synonym: Hore_22350

Alternate gene names: 220933067

Gene position: 2435930-2435160 (Counterclockwise)

Preceding gene: 220933068

Following gene: 220933066

Centisome position: 94.48

GC content: 45.53

Gene sequence:

>771_bases
ATGATTGTCCTTGAAAAAATTATATCCTCATTTGTCTCCCCGCCGGGACTTTTCCTGGTAATCTGGGTGGTTATTACTGT
TTATTTAATTAAAAAAAGGAGTAACCGCCTGATCGTGGGGCTGGCCTGTATATCCCTTGTTTTAATGTATATATTGTCAT
CAGCTGTGGGGGTTATGCTGTTTTTGATACCCCTGGAAACAAAATTCCCGTATTATAATATCAGTAGATATGATAAAGAA
CTCCCTATTGTGGTTCTGGGAGGAGGTATTAATTATTTTGGTGAAAAAGGTGAGGGAAAGTTAAATCCGATAACCCTTCA
GCGGTTAGTAACCGGTTACAGGTTATATAAAGAAGTAGAAACCACCCTGATTTTTACCGGGGGGCAGGGTATCGGCCATT
CCGGCCCCAGTGAGGCTGATGTTGCCGGGGAGTTCCTCCGGGAGCTGGGAATTAATCAGGAAGCTTTAGTTCTGGAAAAC
AGGGCCCGCAATACCTATGAAAACGGATTGTATGTCAGGGATTACCTGGAGCAGAGAAACGGGCTTGATAGAGGTGTTTA
TCTGGTTACTTCGGCTGTTCACCTTCCCCGGGCAGTTGGTGTTTTCCGGAGGCTAAATCTTAAGGTGGTGCCGGTACCGG
CGGGGTATTTTGCTGATCATACCCAGGGCTGGCTTGACTTTTTTCCGGCCCGATCTAATTTGAATGCTACCCTGGCTGCT
ATTCATGAGTGGATTGGCCTTTTGTGGTATAAGGTCAGGGGCAGGATTTAA

Upstream 100 bases:

>100_bases
GGGGTAAACTTGATTTTGGCCCCTGGGAACAGATATTTTACGGTGAGTTTGATGGTCAAAGGGAGAAAAGGGTTCTGGTC
AAAGTAATAGGTGAATAAAA

Downstream 100 bases:

>100_bases
TAATTAAATTTATTAATAAATAAAAGGAGAGGAGAAAAATATGCCAGCAGATCTACACATACATTCTACATATTCAGACG
GGTCTTATACCCCGGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIVLEKIISSFVSPPGLFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVMLFLIPLETKFPYYNISRYDKE
LPIVVLGGGINYFGEKGEGKLNPITLQRLVTGYRLYKEVETTLIFTGGQGIGHSGPSEADVAGEFLRELGINQEALVLEN
RARNTYENGLYVRDYLEQRNGLDRGVYLVTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAA
IHEWIGLLWYKVRGRI

Sequences:

>Translated_256_residues
MIVLEKIISSFVSPPGLFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVMLFLIPLETKFPYYNISRYDKE
LPIVVLGGGINYFGEKGEGKLNPITLQRLVTGYRLYKEVETTLIFTGGQGIGHSGPSEADVAGEFLRELGINQEALVLEN
RARNTYENGLYVRDYLEQRNGLDRGVYLVTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAA
IHEWIGLLWYKVRGRI
>Mature_256_residues
MIVLEKIISSFVSPPGLFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVMLFLIPLETKFPYYNISRYDKE
LPIVVLGGGINYFGEKGEGKLNPITLQRLVTGYRLYKEVETTLIFTGGQGIGHSGPSEADVAGEFLRELGINQEALVLEN
RARNTYENGLYVRDYLEQRNGLDRGVYLVTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAA
IHEWIGLLWYKVRGRI

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=198, Percent_Identity=30.8080808080808, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28734; Mature: 28734

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLEKIISSFVSPPGLFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVML
CEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
FLIPLETKFPYYNISRYDKELPIVVLGGGINYFGEKGEGKLNPITLQRLVTGYRLYKEVE
HHHHHCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TTLIFTGGQGIGHSGPSEADVAGEFLRELGINQEALVLENRARNTYENGLYVRDYLEQRN
EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEHHHCCCHHHCCCHHHHHHHHCC
GLDRGVYLVTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAA
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHH
IHEWIGLLWYKVRGRI
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVLEKIISSFVSPPGLFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVML
CEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
FLIPLETKFPYYNISRYDKELPIVVLGGGINYFGEKGEGKLNPITLQRLVTGYRLYKEVE
HHHHHCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TTLIFTGGQGIGHSGPSEADVAGEFLRELGINQEALVLENRARNTYENGLYVRDYLEQRN
EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEHHHCCCHHHCCCHHHHHHHHCC
GLDRGVYLVTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAA
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHH
IHEWIGLLWYKVRGRI
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]