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The map label for this gene is 220933068

Identifier: 220933068

GI number: 220933068

Start: 2435933

End: 2436220

Strand: Reverse

Name: 220933068

Synonym: Hore_22360

Alternate gene names: NA

Gene position: 2436220-2435933 (Counterclockwise)

Preceding gene: 220933069

Following gene: 220933067

Centisome position: 94.5

GC content: 43.4

Gene sequence:

>288_bases
ATGCATATAACGGCCAGTGTTTTTATTAATGATGATGAACCAGGCCTGCATAGTGACTTTAAAAAGTGGCTGGAGGAACT
TGCTCCCCATGAACCTATATCCCGGTATGCCCATAATGGGTTTGAAACAAATGCTGATGCTCATTTGAAAAGGCAGATTA
TGGGGCGTGAGGTAGTGGTGGCAATAACCGGGGGTAAACTTGATTTTGGCCCCTGGGAACAGATATTTTACGGTGAGTTT
GATGGTCAAAGGGAGAAAAGGGTTCTGGTCAAAGTAATAGGTGAATAA

Upstream 100 bases:

>100_bases
TAACACCAAAAACAGGGTTGAACTTATAAATATTACTGACAGGGTTCAGCAAATTGTTGATAAGAGTGGTATTGATGAGG
GGTTATGCCTTGTTAATGCC

Downstream 100 bases:

>100_bases
AAATGATTGTCCTTGAAAAAATTATATCCTCATTTGTCTCCCCGCCGGGACTTTTCCTGGTAATCTGGGTGGTTATTACT
GTTTATTTAATTAAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MHITASVFINDDEPGLHSDFKKWLEELAPHEPISRYAHNGFETNADAHLKRQIMGREVVVAITGGKLDFGPWEQIFYGEF
DGQREKRVLVKVIGE

Sequences:

>Translated_95_residues
MHITASVFINDDEPGLHSDFKKWLEELAPHEPISRYAHNGFETNADAHLKRQIMGREVVVAITGGKLDFGPWEQIFYGEF
DGQREKRVLVKVIGE
>Mature_95_residues
MHITASVFINDDEPGLHSDFKKWLEELAPHEPISRYAHNGFETNADAHLKRQIMGREVVVAITGGKLDFGPWEQIFYGEF
DGQREKRVLVKVIGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 10864; Mature: 10864

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITASVFINDDEPGLHSDFKKWLEELAPHEPISRYAHNGFETNADAHLKRQIMGREVVV
CEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEE
AITGGKLDFGPWEQIFYGEFDGQREKRVLVKVIGE
EEECCCCCCCCCCCEEECCCCCCCHHEEHEEEECC
>Mature Secondary Structure
MHITASVFINDDEPGLHSDFKKWLEELAPHEPISRYAHNGFETNADAHLKRQIMGREVVV
CEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEE
AITGGKLDFGPWEQIFYGEFDGQREKRVLVKVIGE
EEECCCCCCCCCCCEEECCCCCCCHHEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]