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The map label for this gene is trpH [H]

Identifier: 220933066

GI number: 220933066

Start: 2434274

End: 2435119

Strand: Reverse

Name: trpH [H]

Synonym: Hore_22340

Alternate gene names: 220933066

Gene position: 2435119-2434274 (Counterclockwise)

Preceding gene: 220933067

Following gene: 220933065

Centisome position: 94.45

GC content: 44.33

Gene sequence:

>846_bases
ATGCCAGCAGATCTACACATACATTCTACATATTCAGACGGGTCTTATACCCCGGCTGAACTGGTTAGTTATGCGGCAAA
AAAGGGGTTAAAGACAATAGCTGTGGCTGACCATGATACAGTGGAAGGGGTTGCAGAGGCTTTAAAATACGGCAGGGAAA
GGGGAATTGAGGTTATTCCTGCTATTGAATTTTCGACTTTCCGTAAAAAAGCGGAGATACATATACTCGGGTATTTTATA
GATTATAATAATAATGATTTTCTGGCCGAGATTGATAAGATATATCAGGCCCGGCTGAACAGGGCCAGGAAGATGGTTGA
AAAACTTAATGAGCTCGGAGTTGAGATAAGTTATGAGGAGGTAAGGAACCTGGCTGGTGATGATTATGTAGGACGGCCCC
ATATTGCCAGGGCTATGATCAAAAAGGGTTATATCACTGAGATGGGAGAAGCCTTTACCGATGATTATATCGGGAATAAT
GGTCGGGCTTATGTCCCCAAATATCAGCTATCCCCGGAACGGGCTATTCAATTAATTAAAGAGGCGGATGGTATCCCTGT
CCTGGCCCATCCCCACTTTATTAACAGGGGTGACCCCTTAAAGAAAGAGGAGATCAGCAGGTTGGTGGAGGGAGGCCTTG
AGGGAATAGAGGTCTATCATTCCAAGCATTCTGAAGAAGTCAGCAACTATTACCTGGGGGTAGCCCGGGAACTGGATCTT
CTTATCACTGGAGGTTCAGATTTTCATGGAGATAATTCTCCTGATATAGATATGGGTGATGTTGTTATAGAAGACAGTTA
TGTAGACAGGCTTAAAGCCCACTGGGGAGGTTTTCTGGATGAGTGA

Upstream 100 bases:

>100_bases
CTGGCTGCTATTCATGAGTGGATTGGCCTTTTGTGGTATAAGGTCAGGGGCAGGATTTAATAATTAAATTTATTAATAAA
TAAAAGGAGAGGAGAAAAAT

Downstream 100 bases:

>100_bases
TGATAAAGTTACAATCAAAATTCCCCGTCCCCTTTATAATAATATAAAAAAAGTTATTGATGGTACCGGGTTTAACAGTG
TTACCGAATTTATTGTTTAT

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MPADLHIHSTYSDGSYTPAELVSYAAKKGLKTIAVADHDTVEGVAEALKYGRERGIEVIPAIEFSTFRKKAEIHILGYFI
DYNNNDFLAEIDKIYQARLNRARKMVEKLNELGVEISYEEVRNLAGDDYVGRPHIARAMIKKGYITEMGEAFTDDYIGNN
GRAYVPKYQLSPERAIQLIKEADGIPVLAHPHFINRGDPLKKEEISRLVEGGLEGIEVYHSKHSEEVSNYYLGVARELDL
LITGGSDFHGDNSPDIDMGDVVIEDSYVDRLKAHWGGFLDE

Sequences:

>Translated_281_residues
MPADLHIHSTYSDGSYTPAELVSYAAKKGLKTIAVADHDTVEGVAEALKYGRERGIEVIPAIEFSTFRKKAEIHILGYFI
DYNNNDFLAEIDKIYQARLNRARKMVEKLNELGVEISYEEVRNLAGDDYVGRPHIARAMIKKGYITEMGEAFTDDYIGNN
GRAYVPKYQLSPERAIQLIKEADGIPVLAHPHFINRGDPLKKEEISRLVEGGLEGIEVYHSKHSEEVSNYYLGVARELDL
LITGGSDFHGDNSPDIDMGDVVIEDSYVDRLKAHWGGFLDE
>Mature_280_residues
PADLHIHSTYSDGSYTPAELVSYAAKKGLKTIAVADHDTVEGVAEALKYGRERGIEVIPAIEFSTFRKKAEIHILGYFID
YNNNDFLAEIDKIYQARLNRARKMVEKLNELGVEISYEEVRNLAGDDYVGRPHIARAMIKKGYITEMGEAFTDDYIGNNG
RAYVPKYQLSPERAIQLIKEADGIPVLAHPHFINRGDPLKKEEISRLVEGGLEGIEVYHSKHSEEVSNYYLGVARELDLL
ITGGSDFHGDNSPDIDMGDVVIEDSYVDRLKAHWGGFLDE

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=258, Percent_Identity=31.3953488372093, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31550; Mature: 31419

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADLHIHSTYSDGSYTPAELVSYAAKKGLKTIAVADHDTVEGVAEALKYGRERGIEVIP
CCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEE
AIEFSTFRKKAEIHILGYFIDYNNNDFLAEIDKIYQARLNRARKMVEKLNELGVEISYEE
CCCHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
VRNLAGDDYVGRPHIARAMIKKGYITEMGEAFTDDYIGNNGRAYVPKYQLSPERAIQLIK
HHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHH
EADGIPVLAHPHFINRGDPLKKEEISRLVEGGLEGIEVYHSKHSEEVSNYYLGVARELDL
HCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LITGGSDFHGDNSPDIDMGDVVIEDSYVDRLKAHWGGFLDE
EEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PADLHIHSTYSDGSYTPAELVSYAAKKGLKTIAVADHDTVEGVAEALKYGRERGIEVIP
CCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEE
AIEFSTFRKKAEIHILGYFIDYNNNDFLAEIDKIYQARLNRARKMVEKLNELGVEISYEE
CCCHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
VRNLAGDDYVGRPHIARAMIKKGYITEMGEAFTDDYIGNNGRAYVPKYQLSPERAIQLIK
HHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHH
EADGIPVLAHPHFINRGDPLKKEEISRLVEGGLEGIEVYHSKHSEEVSNYYLGVARELDL
HCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LITGGSDFHGDNSPDIDMGDVVIEDSYVDRLKAHWGGFLDE
EEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]