| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220933065
Identifier: 220933065
GI number: 220933065
Start: 2434039
End: 2434281
Strand: Reverse
Name: 220933065
Synonym: Hore_22330
Alternate gene names: NA
Gene position: 2434281-2434039 (Counterclockwise)
Preceding gene: 220933066
Following gene: 220933064
Centisome position: 94.42
GC content: 32.1
Gene sequence:
>243_bases ATGAGTGATGATAAAGTTACAATCAAAATTCCCCGTCCCCTTTATAATAATATAAAAAAAGTTATTGATGGTACCGGGTT TAACAGTGTTACCGAATTTATTGTTTATGTCATGAGGGATTTAATTTCAACCACCGAGGTTAAAGATAAAGACCGGGAGG AAATATTTAGTAGAGAGGATTTGATAAAAGAGGAAATTAATCTTATAAAACAGCGTTTGAAGAGTTTAGGATACCTGGAA TAA
Upstream 100 bases:
>100_bases GATTTTCATGGAGATAATTCTCCTGATATAGATATGGGTGATGTTGTTATAGAAGACAGTTATGTAGACAGGCTTAAAGC CCACTGGGGAGGTTTTCTGG
Downstream 100 bases:
>100_bases AGAGGGGTAAAAAATGAGGTTAAAAAGGATAATTGTCGTCTGTGGTCTTATAATAAGTTTGTTTTTATTGTTAATACCGC CACCGGCAGGGCTTACGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSDDKVTIKIPRPLYNNIKKVIDGTGFNSVTEFIVYVMRDLISTTEVKDKDREEIFSREDLIKEEINLIKQRLKSLGYLE
Sequences:
>Translated_80_residues MSDDKVTIKIPRPLYNNIKKVIDGTGFNSVTEFIVYVMRDLISTTEVKDKDREEIFSREDLIKEEINLIKQRLKSLGYLE >Mature_79_residues SDDKVTIKIPRPLYNNIKKVIDGTGFNSVTEFIVYVMRDLISTTEVKDKDREEIFSREDLIKEEINLIKQRLKSLGYLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9394; Mature: 9263
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDKVTIKIPRPLYNNIKKVIDGTGFNSVTEFIVYVMRDLISTTEVKDKDREEIFSRED CCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LIKEEINLIKQRLKSLGYLE HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDDKVTIKIPRPLYNNIKKVIDGTGFNSVTEFIVYVMRDLISTTEVKDKDREEIFSRED CCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LIKEEINLIKQRLKSLGYLE HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA