| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932976
Identifier: 220932976
GI number: 220932976
Start: 2333915
End: 2334301
Strand: Reverse
Name: 220932976
Synonym: Hore_21440
Alternate gene names: NA
Gene position: 2334301-2333915 (Counterclockwise)
Preceding gene: 220932977
Following gene: 220932975
Centisome position: 90.54
GC content: 37.47
Gene sequence:
>387_bases TTGATACTACTAATCCGGCAGAATAAGGAGGGTTTAACCTCCTTATTTTTTTATGTTCAGGAGAATTTAGGTAAAGGTGG ATTAGAGATAAGTTTACTATTTTTTTTGTTAAATTATCACACCTCCTGGTGTAAGACCATAATATATATACAAGAAGGTA GTAAAGAGGGGGGTCCCCGGTTGTATACATTAATAATACTCGTGGTTATAATTACCGGGTATACTATGGGGTTTATTTTT CTTATTAAAAATAAGAGCAAGACCCGGAGCCCTACTTTGTATAGAAGTGCAAAGAAGAAGACCCGGGGGATTGGCTATAA ATCTGATGGAGGTGAGGAGTTTGGCACAGTTAAAGGAAGAGATAGAAATGACCAGGGAACCGGTTAA
Upstream 100 bases:
>100_bases CCTGAGCATAAAGATAATATTTTAAAGGAGAGATTTGATAATACGGGAATTGGTGTCATAGAGAGTCCTTCCGGAAAATT AATTATTGTACAATTATTTA
Downstream 100 bases:
>100_bases ACTGCCGGTTGTAGTCGGGGAAAATATAGGCCAGAAGGTTTTAATGTTTCAGATACAGCTACCGGTAAAAGCCCAATACA TAAATGATGTTAAAACGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MILLIRQNKEGLTSLFFYVQENLGKGGLEISLLFFLLNYHTSWCKTIIYIQEGSKEGGPRLYTLIILVVIITGYTMGFIF LIKNKSKTRSPTLYRSAKKKTRGIGYKSDGGEEFGTVKGRDRNDQGTG
Sequences:
>Translated_128_residues MILLIRQNKEGLTSLFFYVQENLGKGGLEISLLFFLLNYHTSWCKTIIYIQEGSKEGGPRLYTLIILVVIITGYTMGFIF LIKNKSKTRSPTLYRSAKKKTRGIGYKSDGGEEFGTVKGRDRNDQGTG >Mature_128_residues MILLIRQNKEGLTSLFFYVQENLGKGGLEISLLFFLLNYHTSWCKTIIYIQEGSKEGGPRLYTLIILVVIITGYTMGFIF LIKNKSKTRSPTLYRSAKKKTRGIGYKSDGGEEFGTVKGRDRNDQGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14452; Mature: 14452
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLIRQNKEGLTSLFFYVQENLGKGGLEISLLFFLLNYHTSWCKTIIYIQEGSKEGGPR CEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCH LYTLIILVVIITGYTMGFIFLIKNKSKTRSPTLYRSAKKKTRGIGYKSDGGEEFGTVKGR HHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DRNDQGTG CCCCCCCC >Mature Secondary Structure MILLIRQNKEGLTSLFFYVQENLGKGGLEISLLFFLLNYHTSWCKTIIYIQEGSKEGGPR CEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCH LYTLIILVVIITGYTMGFIFLIKNKSKTRSPTLYRSAKKKTRGIGYKSDGGEEFGTVKGR HHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DRNDQGTG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA