Click here to switch to the map view.

The map label for this gene is 220932975

Identifier: 220932975

GI number: 220932975

Start: 2332678

End: 2333934

Strand: Reverse

Name: 220932975

Synonym: Hore_21430

Alternate gene names: NA

Gene position: 2333934-2332678 (Counterclockwise)

Preceding gene: 220932976

Following gene: 220932973

Centisome position: 90.53

GC content: 36.75

Gene sequence:

>1257_bases
ATGACCAGGGAACCGGTTAAACTGCCGGTTGTAGTCGGGGAAAATATAGGCCAGAAGGTTTTAATGTTTCAGATACAGCT
ACCGGTAAAAGCCCAATACATAAATGATGTTAAAACGGAGATAGTTAACCTGGAGACGAAGGTTATAAAAGACAGGGTCA
TGGTCAACGGGTATGTAGATACTGTAGTCCTGTTTGTTGGAGAAGATAAGGCTATTCATCGGAGTAGTAACTCAACTGGT
TTTAATTTATTTACCCCTGTTCCAGGGGCCAGGCCAGGTATGAATTTATTTGTTGAGCCTGAAATAGAACAAATAGAGTC
AGAACTAACAGAAGATAGAAAGGTGATAGAACAGAAGTTAGTCGTTCAATTTTTTATAAAGGTTTTAAAAAGAGAGGAAT
TTTACTTAAAAACCGGCCAGGGGCCCCTTGTCAGGACCGAAAGAATTGTAGGGGAGACCCAGCATCAACTGGACTTAAAA
AATAAATCTAAACTGGCTGTTAAGCTTAATAAATTACTTGATTTAGATACCCGGTTACAGGGATTAGAGTACAAAATAAA
GGATAATAGAATCCTTATCCAGGGAACTGTAAAAAGTGATCTCTATTATATGGGGGAAGATGGTATTAAACACCATCAGG
AGGTGAGTATCCCCTTTAATGAAAATATAAATTTTGCTGGAGCCGAACAGGGAATGACTGCAGATATTGAATACAATATA
CTACATGCTGATACCATCAAAGGCGAAGAAAACCAGGAGATAACTGAGGTTATCATTCTGGAATTTAATATAATGGTACT
GGAACAGGTGCAGTTAAAAATACCTACTGGTGATGGACCTCTGGTTATGGTCTCAGAGGTTATTGGTGAAAATACCGGTG
AATTATTAAAGCAACTTGAAATTCCAATCCAGAATAAAATAAGAAAAATAAGCAGGGTGGATCCTACTATAATAGCTCTT
AAAGGGGTATTAATTGAAGACAGAATTGTAGCTCATGGTGAAATTAAATTATTTATATATTATATCGGTAATGATGGAAT
CGAATATATCAAAACAGTAACCTCTCCCTTTAATACCCTGATCAATCTGGCCGGGACGAGAACAGGGATGGAAAGCGAAC
TGGAAGCAAATACAGCTTACATAGATTATCATTTTAATCCATCAAAGGGGATAATAAATTGTAAAATAATAATAGAAGTA
TTTGCCAAGGTATTTGAAAAGATACAGTTTAACATTGTCGAAGAAAAGGAGGCCTAG

Upstream 100 bases:

>100_bases
AGCCCTACTTTGTATAGAAGTGCAAAGAAGAAGACCCGGGGGATTGGCTATAAATCTGATGGAGGTGAGGAGTTTGGCAC
AGTTAAAGGAAGAGATAGAA

Downstream 100 bases:

>100_bases
AGGTTGTTGTATTCAAAGCTTTCCCGGTCCAGGACTTCAGCAGTATCACCGTTATACAGGTTGAAAAGAATTCTATCTTT
ATAAAAATACCTGGTGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTREPVKLPVVVGENIGQKVLMFQIQLPVKAQYINDVKTEIVNLETKVIKDRVMVNGYVDTVVLFVGEDKAIHRSSNSTG
FNLFTPVPGARPGMNLFVEPEIEQIESELTEDRKVIEQKLVVQFFIKVLKREEFYLKTGQGPLVRTERIVGETQHQLDLK
NKSKLAVKLNKLLDLDTRLQGLEYKIKDNRILIQGTVKSDLYYMGEDGIKHHQEVSIPFNENINFAGAEQGMTADIEYNI
LHADTIKGEENQEITEVIILEFNIMVLEQVQLKIPTGDGPLVMVSEVIGENTGELLKQLEIPIQNKIRKISRVDPTIIAL
KGVLIEDRIVAHGEIKLFIYYIGNDGIEYIKTVTSPFNTLINLAGTRTGMESELEANTAYIDYHFNPSKGIINCKIIIEV
FAKVFEKIQFNIVEEKEA

Sequences:

>Translated_418_residues
MTREPVKLPVVVGENIGQKVLMFQIQLPVKAQYINDVKTEIVNLETKVIKDRVMVNGYVDTVVLFVGEDKAIHRSSNSTG
FNLFTPVPGARPGMNLFVEPEIEQIESELTEDRKVIEQKLVVQFFIKVLKREEFYLKTGQGPLVRTERIVGETQHQLDLK
NKSKLAVKLNKLLDLDTRLQGLEYKIKDNRILIQGTVKSDLYYMGEDGIKHHQEVSIPFNENINFAGAEQGMTADIEYNI
LHADTIKGEENQEITEVIILEFNIMVLEQVQLKIPTGDGPLVMVSEVIGENTGELLKQLEIPIQNKIRKISRVDPTIIAL
KGVLIEDRIVAHGEIKLFIYYIGNDGIEYIKTVTSPFNTLINLAGTRTGMESELEANTAYIDYHFNPSKGIINCKIIIEV
FAKVFEKIQFNIVEEKEA
>Mature_417_residues
TREPVKLPVVVGENIGQKVLMFQIQLPVKAQYINDVKTEIVNLETKVIKDRVMVNGYVDTVVLFVGEDKAIHRSSNSTGF
NLFTPVPGARPGMNLFVEPEIEQIESELTEDRKVIEQKLVVQFFIKVLKREEFYLKTGQGPLVRTERIVGETQHQLDLKN
KSKLAVKLNKLLDLDTRLQGLEYKIKDNRILIQGTVKSDLYYMGEDGIKHHQEVSIPFNENINFAGAEQGMTADIEYNIL
HADTIKGEENQEITEVIILEFNIMVLEQVQLKIPTGDGPLVMVSEVIGENTGELLKQLEIPIQNKIRKISRVDPTIIALK
GVLIEDRIVAHGEIKLFIYYIGNDGIEYIKTVTSPFNTLINLAGTRTGMESELEANTAYIDYHFNPSKGIINCKIIIEVF
AKVFEKIQFNIVEEKEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47383; Mature: 47251

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTREPVKLPVVVGENIGQKVLMFQIQLPVKAQYINDVKTEIVNLETKVIKDRVMVNGYVD
CCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEE
TVVLFVGEDKAIHRSSNSTGFNLFTPVPGARPGMNLFVEPEIEQIESELTEDRKVIEQKL
EEEEEECCCCEEECCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VVQFFIKVLKREEFYLKTGQGPLVRTERIVGETQHQLDLKNKSKLAVKLNKLLDLDTRLQ
HHHHHHHHHCCCCEEEECCCCCCEEHHHHHCCCHHHCCCCCCCEEEEEEHHHHCCCHHCC
GLEYKIKDNRILIQGTVKSDLYYMGEDGIKHHQEVSIPFNENINFAGAEQGMTADIEYNI
CCEEEEECCEEEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
LHADTIKGEENQEITEVIILEFNIMVLEQVQLKIPTGDGPLVMVSEVIGENTGELLKQLE
EEEEECCCCCCCCEEEEEEEEECEEEEEEEEEEECCCCCCEEEEHHHHCCCHHHHHHHHC
IPIQNKIRKISRVDPTIIALKGVLIEDRIVAHGEIKLFIYYIGNDGIEYIKTVTSPFNTL
CCHHHHHHHHHCCCCEEEEEECEEEECEEEEECEEEEEEEEECCCCHHHHHHHHHHHHHH
INLAGTRTGMESELEANTAYIDYHFNPSKGIINCKIIIEVFAKVFEKIQFNIVEEKEA
HHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure 
TREPVKLPVVVGENIGQKVLMFQIQLPVKAQYINDVKTEIVNLETKVIKDRVMVNGYVD
CCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEE
TVVLFVGEDKAIHRSSNSTGFNLFTPVPGARPGMNLFVEPEIEQIESELTEDRKVIEQKL
EEEEEECCCCEEECCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VVQFFIKVLKREEFYLKTGQGPLVRTERIVGETQHQLDLKNKSKLAVKLNKLLDLDTRLQ
HHHHHHHHHCCCCEEEECCCCCCEEHHHHHCCCHHHCCCCCCCEEEEEEHHHHCCCHHCC
GLEYKIKDNRILIQGTVKSDLYYMGEDGIKHHQEVSIPFNENINFAGAEQGMTADIEYNI
CCEEEEECCEEEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
LHADTIKGEENQEITEVIILEFNIMVLEQVQLKIPTGDGPLVMVSEVIGENTGELLKQLE
EEEEECCCCCCCCEEEEEEEEECEEEEEEEEEEECCCCCCEEEEHHHHCCCHHHHHHHHC
IPIQNKIRKISRVDPTIIALKGVLIEDRIVAHGEIKLFIYYIGNDGIEYIKTVTSPFNTL
CCHHHHHHHHHCCCCEEEEEECEEEECEEEEECEEEEEEEEECCCCHHHHHHHHHHHHHH
INLAGTRTGMESELEANTAYIDYHFNPSKGIINCKIIIEVFAKVFEKIQFNIVEEKEA
HHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA