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The map label for this gene is yurN [H]

Identifier: 220932894

GI number: 220932894

Start: 2230266

End: 2231165

Strand: Reverse

Name: yurN [H]

Synonym: Hore_20620

Alternate gene names: 220932894

Gene position: 2231165-2230266 (Counterclockwise)

Preceding gene: 220932895

Following gene: 220932893

Centisome position: 86.54

GC content: 34.33

Gene sequence:

>900_bases
TTGAATATTTTAAACAAAATGAAAACCAACTACAAATATAGGCGAAAACTGATGGGGTTTTTATTCATTATACCCAGTAT
GATCGTATTTCTGTTTTTTATATTTTTCCCTATTGTGGATTCATTCAGGTTAAGTTTTTATGAGTGGAGTATAATCTCTC
CGGAAAAAACATATCTGGGGCTACAGAATTATAATGAGATGTTTTCTGATTGGAGATTCTGGAATTCTCTGAGGAATACT
GCCTATTATGCCATCGGTTATGTACCTGTTGGAGTATCTTTATCTTTGATATTAGCCCTCCTGGTCAATACAAAAATTAA
AGGAAGAAACTTTTTCAGAATGACATATTTTTTACCGGCTATTGCTTCAATGTCAGTTATCGCAATAATATGGACTTTTT
TGCTGGATCCTGATATCGGTATAATATCATATTATTTAAAGCTATTTGGACTTAATACCTACGCCTGGTTAAGAAGTGTT
AAATGGGCCATGCCGGCTGTTATTCTGGTTGGTATATGGAAGAATATGGGGTTTAATATGGTTATATTTCTGGCTGGCCT
CCAGGGTATAAGTGATATGTATTATGAAGCTGCCGAAATTGATGGGGCCAACAAATGGCAACAATTTATTCACATTACGC
TGCCCCTGTTAAAACCAACAATGACTTTTGTAGTTATAATGTCTGTTATTACATCTTTTCAGGTGTTTGACCAGGTTTAT
GTTATGACAAAAGGTGGCCCTCTCTTTTCCACAGAAACATTAGTACAGTACATTTATCACCTTGGGTTTGAAAACTTTCA
GATGGGGTATGCAGCAACCATTGCCTATACTCTATTTATAATAATAATTATAGTAACTATTTTCCAGCTTAAATACTTTA
AAATGGATCTAGACAACTAG

Upstream 100 bases:

>100_bases
TAAAAGAATTATAGATTAAATGTAAAAACACAATTGTATGGGGTTCTATCCGGGCCCCATACATTAATTATACCCGAGAT
TACACAGGAGGCGGAAGATA

Downstream 100 bases:

>100_bases
GGGTGGATGAAAATGACCAGAACAATTAATAAAATCCTTATATATTTCATTTTACTGTTTTTTTTAGTTATTACTTTATA
CCCTTTTATATGGATGGTGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MNILNKMKTNYKYRRKLMGFLFIIPSMIVFLFFIFFPIVDSFRLSFYEWSIISPEKTYLGLQNYNEMFSDWRFWNSLRNT
AYYAIGYVPVGVSLSLILALLVNTKIKGRNFFRMTYFLPAIASMSVIAIIWTFLLDPDIGIISYYLKLFGLNTYAWLRSV
KWAMPAVILVGIWKNMGFNMVIFLAGLQGISDMYYEAAEIDGANKWQQFIHITLPLLKPTMTFVVIMSVITSFQVFDQVY
VMTKGGPLFSTETLVQYIYHLGFENFQMGYAATIAYTLFIIIIIVTIFQLKYFKMDLDN

Sequences:

>Translated_299_residues
MNILNKMKTNYKYRRKLMGFLFIIPSMIVFLFFIFFPIVDSFRLSFYEWSIISPEKTYLGLQNYNEMFSDWRFWNSLRNT
AYYAIGYVPVGVSLSLILALLVNTKIKGRNFFRMTYFLPAIASMSVIAIIWTFLLDPDIGIISYYLKLFGLNTYAWLRSV
KWAMPAVILVGIWKNMGFNMVIFLAGLQGISDMYYEAAEIDGANKWQQFIHITLPLLKPTMTFVVIMSVITSFQVFDQVY
VMTKGGPLFSTETLVQYIYHLGFENFQMGYAATIAYTLFIIIIIVTIFQLKYFKMDLDN
>Mature_299_residues
MNILNKMKTNYKYRRKLMGFLFIIPSMIVFLFFIFFPIVDSFRLSFYEWSIISPEKTYLGLQNYNEMFSDWRFWNSLRNT
AYYAIGYVPVGVSLSLILALLVNTKIKGRNFFRMTYFLPAIASMSVIAIIWTFLLDPDIGIISYYLKLFGLNTYAWLRSV
KWAMPAVILVGIWKNMGFNMVIFLAGLQGISDMYYEAAEIDGANKWQQFIHITLPLLKPTMTFVVIMSVITSFQVFDQVY
VMTKGGPLFSTETLVQYIYHLGFENFQMGYAATIAYTLFIIIIIVTIFQLKYFKMDLDN

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=285, Percent_Identity=28.4210526315789, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787570, Length=269, Percent_Identity=31.5985130111524, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790465, Length=220, Percent_Identity=30.9090909090909, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34928; Mature: 34928

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILNKMKTNYKYRRKLMGFLFIIPSMIVFLFFIFFPIVDSFRLSFYEWSIISPEKTYLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHCC
LQNYNEMFSDWRFWNSLRNTAYYAIGYVPVGVSLSLILALLVNTKIKGRNFFRMTYFLPA
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
IASMSVIAIIWTFLLDPDIGIISYYLKLFGLNTYAWLRSVKWAMPAVILVGIWKNMGFNM
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VIFLAGLQGISDMYYEAAEIDGANKWQQFIHITLPLLKPTMTFVVIMSVITSFQVFDQVY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VMTKGGPLFSTETLVQYIYHLGFENFQMGYAATIAYTLFIIIIIVTIFQLKYFKMDLDN
EEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNILNKMKTNYKYRRKLMGFLFIIPSMIVFLFFIFFPIVDSFRLSFYEWSIISPEKTYLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHCC
LQNYNEMFSDWRFWNSLRNTAYYAIGYVPVGVSLSLILALLVNTKIKGRNFFRMTYFLPA
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
IASMSVIAIIWTFLLDPDIGIISYYLKLFGLNTYAWLRSVKWAMPAVILVGIWKNMGFNM
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VIFLAGLQGISDMYYEAAEIDGANKWQQFIHITLPLLKPTMTFVVIMSVITSFQVFDQVY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VMTKGGPLFSTETLVQYIYHLGFENFQMGYAATIAYTLFIIIIIVTIFQLKYFKMDLDN
EEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]