Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is malT [H]

Identifier: 220932886

GI number: 220932886

Start: 2218266

End: 2220929

Strand: Reverse

Name: malT [H]

Synonym: Hore_20540

Alternate gene names: 220932886

Gene position: 2220929-2218266 (Counterclockwise)

Preceding gene: 220932887

Following gene: 220932885

Centisome position: 86.14

GC content: 36.34

Gene sequence:

>2664_bases
ATGAGTTATAATCTTAAAAAAGACTTTAATTTAACAGCCTACTTGAAAACAAAATTACATCCAGCACCTTTACCTTCTGG
TATCATTCACCGTGAAAGATTATTAAATAAACTTGCTGAGGGTAGAAAAAACGGAACTAAATTAATATTAGTTTCTGCTC
CGGCAGGGTATGGTAAATCTACCCTGATTACTGACTGGCTTGTAAGGGATAAGATTAAACATGCCTGGCTCTCTATTGAA
GATGAGGATAACAAATTAGTTCCCTTTTTTGAATATCTGTTATCCTCCCTCCAGGAAATTAGTGAAGGTTTTGGGAAAAC
AATCAGGAGTATACTGGCTTCCCCCCAGCTGCCACCTATCAATGTCCTCATTTCTTTGTTAATCCAGGAATTGGAGGCTT
TACCCGCACCACTTACCATTGTTCTGGATGACTATCATTTTATTTCAAACAGGCAAATAAACCAGGGGATTTCTTATCTC
CTGGAGCACCTACCTTTAGATTTTAAGTTGGTTATTATTAGCAGGCAGGATCCCCCCATTCCCCTGGGCCGTTTGAGGGC
AAATAATCAGCTTACTGAAATAAGAATGAAGGATTTAAAATTTAATAAGCAGGAGGCTAGTTCTTTTTTCGAAGAGAACC
TGCAGATAGCTCTTAATGAAGAGGAGGTTTCTCTTCTTAATTCTCGTACTGAAGGCTGGGTATCTGGCTTACAGCTTGCC
GGGTTATCGTTAAAAGAGTCTGCAGAGGGAGAAAGAAAGGTATTTATTGATAATTTTTCGGGAAGTAATCGTTTTGTTAT
TGATTACCTCTTTGAAGAGGTTCTGGTCAGGCAAAAGCCTGAAGTCAAGGATTTTCTTTGTAAAACCTCAGTTTTGAATA
AATTTAATGATTCAATCTGTAATAGATTAACAGAAGACAGTAATAGTAAAAGTGTTATAACAGAGCTGGATAAAGGCAAT
CATTTTATCATACCCCTGGATGTAAATAAAAGCTGGTATCGTTATCACCACTTATTCCGGGATTTCTTAACCTCTGAACT
CTCTTTAGAAGAAAAAAAAGGATTACACAAAAAAGCTGCAAGCTGGTATGACGAAAGGGGCTATCTGCATGAGGCCATAT
ATCATTCCAGGGAAGCAGATGATTTAGACCTTTTAGAGAGGCTAATTACTAAGCTGACTATTGATTTATTTAATAAAGGG
GAAGTTGAAACCCTTTTAGAATATCTCGAATATTTACCAGAAAAAAGGCTTAAAAAAAATAGTAAACTCTTAATTTTTAA
AACCTGGTGCCTGTTTTTGACTGGAAAGGGGAGGGAAATAGCTGGTTATCTCCAGCTTATCAAAGACAGGGAAGATATTA
ATAAAAATGACTCTTATTATGGTTTGTTTTTAGCCTTAATAGTCCTTTTTGATCATCAAGAAAAAAACCTGGAGATGGCT
GAAAAAGCGGTAGACATGATTGATAATAAAGAACACTTCTTTCGAATAGCTGCTTTATTATCCCTGGGGCAGGTTCAGGC
CTCCATGGGGAAATATAGCGAGGCGGTTATTACCTTTAAAGAGGCAATGAATATTGGGAAGAAGACAGACTTTCATTTTG
GCACCATTACTGCTTTAATCAATCTTGCCGTAAATTTAAACTGGCTGGGTCAGAGAAAAGAGGCAGTTTTAATCTGTGAG
AATTCCCTTTATGAATATACCGATTCCAGGGGAAAAATTTATCCCCTGGCCAATTTAATATATATTCCTCTGGGAATCCT
CAAATATGAAAATAACCAACTTAAATCAGCTTATAGTTATCTTCAAAAGGGGATAACTTTTTGCCAGGAGTGGTCCTTTG
TCAGGATTATGGGCCTTGGGGAATGGTATATGGGACAGACCCTCTTTGCCCTTGGAAAGAAAGAAGAAGCGATAGAATTT
GTTGAAGAAATAATTAACCTGGGTAAGCAGCTGGGTTTAAAGGGTCTTATCTTTTTTATGAATTGTCTGGAGGCTGATTT
ATATGTAAAAGCAGACAATAAAGAAAAAGCTTTTCTCTGGGCAGAAGAAATAAAAAAATTCCCTGACCAGATGATAACTA
TTTCAGGGATATTTATGGGGTTTACCTATACCCGGGTTTTACTGAGTCAACGCAAAATAGAAGAAGTTGACTCTATTTTG
TCCAGGATTAATAATCTGGGGGTTAAGGGGCGTAATCTTATTACTGTTAGACTTTTACAAACTAAAATCAGTTATCTGGA
GGGTAAAAAAAATAAGGCTTTAAAATGTCTGGTTGAAGCAGTTAAATTAGCTAGACCAGAGGGGTATACCAGAGCATTTC
TAGATGAGGGTGAAGTAATTTATAAACTTTTATCTGAAGTTAAAGATGTTTCACCGGCTTTCATTACTGGTATTCTTGAG
GCCTTTGACTTTAAAAAAAGCACATTTAATAATCAAAATTTGATTGAACCTCTAAGTGAGCGAGAACTTGAAATTCTGGG
GTTAATTGTTAATGGTTTATCTAATAAAGAGATTGCTAAAAAGCTTTATATTACAGTAGGTACTACTAAATGGCATATAA
GCAATATTTATGGTAAATTAGGTGTTAATAAACGTGCTCAGGCTATAAAAAAAGCTTTACAATTAGAACTGATTGCCGCT
CCCGGACCAGAAGAAAACCTTTGA

Upstream 100 bases:

>100_bases
AGCTTTTTTTACTAACCAAATTTTTTTGTCGAAAAAAGGAGTTTAAGACCTTTAAAAGAATAGTTTAGTTATAATTACCG
TCAAAGAGGAGATTGAATAT

Downstream 100 bases:

>100_bases
TAGGAAAGCTGCGAACAGGGCTCATTCTGGTAGTAAAATATTTAAAAAAATAATTTTCAAAAAATTTGACTTTATGAAAA
TATTTATATATAATATATTT

Product: regulatory protein LuxR

Products: NA

Alternate protein names: ATP-dependent transcriptional activator malT [H]

Number of amino acids: Translated: 887; Mature: 886

Protein sequence:

>887_residues
MSYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKSTLITDWLVRDKIKHAWLSIE
DEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPINVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYL
LEHLPLDFKLVIISRQDPPIPLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA
GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSICNRLTEDSNSKSVITELDKGN
HFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAASWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKG
EVETLLEYLEYLPEKRLKKNSKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA
EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALINLAVNLNWLGQRKEAVLICE
NSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSYLQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEF
VEEIINLGKQLGLKGLIFFMNCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL
SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVIYKLLSEVKDVSPAFITGILE
AFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAKKLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAA
PGPEENL

Sequences:

>Translated_887_residues
MSYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKSTLITDWLVRDKIKHAWLSIE
DEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPINVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYL
LEHLPLDFKLVIISRQDPPIPLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA
GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSICNRLTEDSNSKSVITELDKGN
HFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAASWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKG
EVETLLEYLEYLPEKRLKKNSKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA
EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALINLAVNLNWLGQRKEAVLICE
NSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSYLQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEF
VEEIINLGKQLGLKGLIFFMNCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL
SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVIYKLLSEVKDVSPAFITGILE
AFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAKKLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAA
PGPEENL
>Mature_886_residues
SYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKSTLITDWLVRDKIKHAWLSIED
EDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPINVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYLL
EHLPLDFKLVIISRQDPPIPLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLAG
LSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSICNRLTEDSNSKSVITELDKGNH
FIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAASWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKGE
VETLLEYLEYLPEKRLKKNSKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMAE
KAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALINLAVNLNWLGQRKEAVLICEN
SLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSYLQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEFV
EEIINLGKQLGLKGLIFFMNCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSILS
RINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVIYKLLSEVKDVSPAFITGILEA
FDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAKKLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAAP
GPEENL

Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]

COG id: COG2909

COG function: function code K; ATP-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI2367223, Length=911, Percent_Identity=25.9055982436883, Blast_Score=265, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 101575; Mature: 101444

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKS
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
TLITDWLVRDKIKHAWLSIEDEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPI
HHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
NVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYLLEHLPLDFKLVIISRQDPPI
HHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
PLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA
CHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEECHHHHHHHHCCCHHHHHHHHHC
GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSIC
CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
NRLTEDSNSKSVITELDKGNHFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAA
HHHCCCCCCCHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHH
SWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKGEVETLLEYLEYLPEKRLKKN
HHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCC
SKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA
CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NLAVNLNWLGQRKEAVLICENSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSY
HHHHCCEECCCCCCEEEEECCCHHHHHCCCCCEEEHHHHHHHHHHHEEECCCHHHHHHHH
LQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEFVEEIINLGKQLGLKGLIFFM
HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
NCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL
HHHCCCEEEEECCCCCCEEEHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVI
HHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHH
YKLLSEVKDVSPAFITGILEAFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAK
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHH
KLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAAPGPEENL
EEEEEECCCEEEHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure 
SYNLKKDFNLTAYLKTKLHPAPLPSGIIHRERLLNKLAEGRKNGTKLILVSAPAGYGKS
CCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
TLITDWLVRDKIKHAWLSIEDEDNKLVPFFEYLLSSLQEISEGFGKTIRSILASPQLPPI
HHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
NVLISLLIQELEALPAPLTIVLDDYHFISNRQINQGISYLLEHLPLDFKLVIISRQDPPI
HHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
PLGRLRANNQLTEIRMKDLKFNKQEASSFFEENLQIALNEEEVSLLNSRTEGWVSGLQLA
CHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEECHHHHHHHHCCCHHHHHHHHHC
GLSLKESAEGERKVFIDNFSGSNRFVIDYLFEEVLVRQKPEVKDFLCKTSVLNKFNDSIC
CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
NRLTEDSNSKSVITELDKGNHFIIPLDVNKSWYRYHHLFRDFLTSELSLEEKKGLHKKAA
HHHCCCCCCCHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHH
SWYDERGYLHEAIYHSREADDLDLLERLITKLTIDLFNKGEVETLLEYLEYLPEKRLKKN
HHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCC
SKLLIFKTWCLFLTGKGREIAGYLQLIKDREDINKNDSYYGLFLALIVLFDHQEKNLEMA
CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
EKAVDMIDNKEHFFRIAALLSLGQVQASMGKYSEAVITFKEAMNIGKKTDFHFGTITALI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NLAVNLNWLGQRKEAVLICENSLYEYTDSRGKIYPLANLIYIPLGILKYENNQLKSAYSY
HHHHCCEECCCCCCEEEEECCCHHHHHCCCCCEEEHHHHHHHHHHHEEECCCHHHHHHHH
LQKGITFCQEWSFVRIMGLGEWYMGQTLFALGKKEEAIEFVEEIINLGKQLGLKGLIFFM
HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
NCLEADLYVKADNKEKAFLWAEEIKKFPDQMITISGIFMGFTYTRVLLSQRKIEEVDSIL
HHHCCCEEEEECCCCCCEEEHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRINNLGVKGRNLITVRLLQTKISYLEGKKNKALKCLVEAVKLARPEGYTRAFLDEGEVI
HHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHH
YKLLSEVKDVSPAFITGILEAFDFKKSTFNNQNLIEPLSERELEILGLIVNGLSNKEIAK
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHH
KLYITVGTTKWHISNIYGKLGVNKRAQAIKKALQLELIAAPGPEENL
EEEEEECCCEEEHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA