| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is ulaA [H]
Identifier: 220932850
GI number: 220932850
Start: 2176340
End: 2177605
Strand: Reverse
Name: ulaA [H]
Synonym: Hore_20180
Alternate gene names: 220932850
Gene position: 2177605-2176340 (Counterclockwise)
Preceding gene: 220932851
Following gene: 220932849
Centisome position: 84.46
GC content: 36.18
Gene sequence:
>1266_bases ATGCAATTTTTAGATTTTTTAGTTAATGATATATTAAGTGAGCCAGCTGTTTTAATTGGAGTAATGACATTTATTGGTCT GGTAGCTGCTAAAAAGAACTTCTCTCAAATTATGTCAGGGACTTTTAAAAGTATTATAGGTTTTGTTATCCTGGGGGCAG GGGCAGGGGTTTTAGTTCAAAGTTTAAATAATTTAGGGCCAATCATTACAGAAGCCTTTAATATTCATGGGGTAGTTCCA ACTAATGAAGCTGTAGTAGCTGTAGCACAAAAAACATTAGGAAAAGAAACTGCTTTAATTATGGGATTTGGCTTTCTAGC CAATCTGGCTTATGCTCGTTTTACTCCATTGAAGTATATATTTTTGACAGGACATCATACGTTCTTTATGGCGGCTTTAT TGGCAGCTGTATTGGGAACTGCAGGCTTAACTGGAGCTCCATTAGTAATTGTAGGGTCAGCAATATTAGGTTTTCTAATG GTTTTGATGCCGGCATTGGCTGACTCGTTTATGAAAGAAATAACTGGCAGTGATGATATTGCTTTAGGACATTTTGGAAC TACTGCTTACGTTGTTTCTGGTTTTATAGGCAAGTTAGTAGGGAATCCAGAAGATTCTACAGAAGATATTGAAGTTCCAA AGTCATTGGGCTTTTTAAAACAGTCATTATTGTCGACTGCTATAACAATGACAGTTATCTTTTTAATTATTGTTCTAAAG GCTGGTCCAGAAATTGTTAGTAAATATGCAGGAGACCAGAGCTTATTTATGTTTGCTGTAATGCAAGGGATTACTTTTGC TGCAGGAGTTAGTATTATCATGTCAGGTGTAAGAATGATTTTGGGAGAAATTGTCCCAGCTTTTGAAGGAATCGTTGAAA AAGTAGTTCCAGATGCTAAACCAGCATTAGATTGCCCGGTTACTTTCAATTTTGCTCCTACAGCTGTAACTATTGGTTTC TTATCTAGTTTTTTAGGTGGAATTGTAGGAATGTTTTTGCTAGGGCCATTAGGACTGGCTTTAATTATTCCAGGACTAGT ACCTCATTTTTTCTGTGGGGCTACTGCTGGAGTATTTGGTAATGCTACTGGTGGGAAAAAGGGAGCTGTTTTAGGAGCAT TTGTTCATGGAATTATGATTACTTTCTTGCCAGCTTTATTACTTCCGGTGTTAGGAAATTTAGGATTTGCTAATATTACT TTTGGAGATGCTGATTTTGGAGTTGTAGGTATTATTATTGGAACGATAGCTAAATTATTTAGTTAA
Upstream 100 bases:
>100_bases CCTGCCAGTTTTTATTCTGATTTGATAAGTATTTTAGCTAATTGTGGAGTTGCCTTTGTTTTGGTTCCTCATCATTTAAA AACAAACGAGGAGGAATAAA
Downstream 100 bases:
>100_bases TAATTTTTTAAATCTAAAGAGTAAAGAAGGGCATTAATACCCTTCTTTACTCTTTAAAAGTTAATATCATTAACTGATAC TGGTATTGCGAGTTTTTCAA
Product: putative sugar-specific permease SgaT/UlaA
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MQFLDFLVNDILSEPAVLIGVMTFIGLVAAKKNFSQIMSGTFKSIIGFVILGAGAGVLVQSLNNLGPIITEAFNIHGVVP TNEAVVAVAQKTLGKETALIMGFGFLANLAYARFTPLKYIFLTGHHTFFMAALLAAVLGTAGLTGAPLVIVGSAILGFLM VLMPALADSFMKEITGSDDIALGHFGTTAYVVSGFIGKLVGNPEDSTEDIEVPKSLGFLKQSLLSTAITMTVIFLIIVLK AGPEIVSKYAGDQSLFMFAVMQGITFAAGVSIIMSGVRMILGEIVPAFEGIVEKVVPDAKPALDCPVTFNFAPTAVTIGF LSSFLGGIVGMFLLGPLGLALIIPGLVPHFFCGATAGVFGNATGGKKGAVLGAFVHGIMITFLPALLLPVLGNLGFANIT FGDADFGVVGIIIGTIAKLFS
Sequences:
>Translated_421_residues MQFLDFLVNDILSEPAVLIGVMTFIGLVAAKKNFSQIMSGTFKSIIGFVILGAGAGVLVQSLNNLGPIITEAFNIHGVVP TNEAVVAVAQKTLGKETALIMGFGFLANLAYARFTPLKYIFLTGHHTFFMAALLAAVLGTAGLTGAPLVIVGSAILGFLM VLMPALADSFMKEITGSDDIALGHFGTTAYVVSGFIGKLVGNPEDSTEDIEVPKSLGFLKQSLLSTAITMTVIFLIIVLK AGPEIVSKYAGDQSLFMFAVMQGITFAAGVSIIMSGVRMILGEIVPAFEGIVEKVVPDAKPALDCPVTFNFAPTAVTIGF LSSFLGGIVGMFLLGPLGLALIIPGLVPHFFCGATAGVFGNATGGKKGAVLGAFVHGIMITFLPALLLPVLGNLGFANIT FGDADFGVVGIIIGTIAKLFS >Mature_421_residues MQFLDFLVNDILSEPAVLIGVMTFIGLVAAKKNFSQIMSGTFKSIIGFVILGAGAGVLVQSLNNLGPIITEAFNIHGVVP TNEAVVAVAQKTLGKETALIMGFGFLANLAYARFTPLKYIFLTGHHTFFMAALLAAVLGTAGLTGAPLVIVGSAILGFLM VLMPALADSFMKEITGSDDIALGHFGTTAYVVSGFIGKLVGNPEDSTEDIEVPKSLGFLKQSLLSTAITMTVIFLIIVLK AGPEIVSKYAGDQSLFMFAVMQGITFAAGVSIIMSGVRMILGEIVPAFEGIVEKVVPDAKPALDCPVTFNFAPTAVTIGF LSSFLGGIVGMFLLGPLGLALIIPGLVPHFFCGATAGVFGNATGGKKGAVLGAFVHGIMITFLPALLLPVLGNLGFANIT FGDADFGVVGIIIGTIAKLFS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=382, Percent_Identity=30.6282722513089, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 43604; Mature: 43604
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLDFLVNDILSEPAVLIGVMTFIGLVAAKKNFSQIMSGTFKSIIGFVILGAGAGVLVQ CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLNNLGPIITEAFNIHGVVPTNEAVVAVAQKTLGKETALIMGFGFLANLAYARFTPLKYI HHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE FLTGHHTFFMAALLAAVLGTAGLTGAPLVIVGSAILGFLMVLMPALADSFMKEITGSDDI EEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALGHFGTTAYVVSGFIGKLVGNPEDSTEDIEVPKSLGFLKQSLLSTAITMTVIFLIIVLK EECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGPEIVSKYAGDQSLFMFAVMQGITFAAGVSIIMSGVRMILGEIVPAFEGIVEKVVPDAK CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PALDCPVTFNFAPTAVTIGFLSSFLGGIVGMFLLGPLGLALIIPGLVPHFFCGATAGVFG CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NATGGKKGAVLGAFVHGIMITFLPALLLPVLGNLGFANITFGDADFGVVGIIIGTIAKLF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHH S C >Mature Secondary Structure MQFLDFLVNDILSEPAVLIGVMTFIGLVAAKKNFSQIMSGTFKSIIGFVILGAGAGVLVQ CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLNNLGPIITEAFNIHGVVPTNEAVVAVAQKTLGKETALIMGFGFLANLAYARFTPLKYI HHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE FLTGHHTFFMAALLAAVLGTAGLTGAPLVIVGSAILGFLMVLMPALADSFMKEITGSDDI EEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALGHFGTTAYVVSGFIGKLVGNPEDSTEDIEVPKSLGFLKQSLLSTAITMTVIFLIIVLK EECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGPEIVSKYAGDQSLFMFAVMQGITFAAGVSIIMSGVRMILGEIVPAFEGIVEKVVPDAK CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PALDCPVTFNFAPTAVTIGFLSSFLGGIVGMFLLGPLGLALIIPGLVPHFFCGATAGVFG CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NATGGKKGAVLGAFVHGIMITFLPALLLPVLGNLGFANITFGDADFGVVGIIIGTIAKLF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHH S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]