| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932851
Identifier: 220932851
GI number: 220932851
Start: 2177607
End: 2178293
Strand: Reverse
Name: 220932851
Synonym: Hore_20190
Alternate gene names: NA
Gene position: 2178293-2177607 (Counterclockwise)
Preceding gene: 220932852
Following gene: 220932850
Centisome position: 84.49
GC content: 32.61
Gene sequence:
>687_bases ATGACTGAATATTATCCAGATATTGCAATACCTCCAGGTGAAACCTTATTAGAATTGATAGAAACAAATCATATGACACA GGCAGAACTTTCTAAAAGAATTGGTTTTTCAAAAAAGCACATTAATGAAATTATTAAAGGAAAAGCAGCCATTACTGCTG AAACTGCTATTAAACTGGAAAATATTTTTTCTCTTCCGGCCAGTTTCTGGATTAATTTAGAAGCTAATTATAGAGAGACT TTAGCTAGAATAGATGAAAAGCAGAGTGATGAAGAAAAAAAGATTGCCCAAAGTATACCTTATTCTGAAATGGCAGGTTA TAACTGGGTTCCTAAAACACGCAAATTGAAAGAGAAGATATCTAATTTAAGAAATTTTTTTCGAGTATCTAATCTTACTT TGATTTTTGAAACTCCAGCTTATAATGCAGCCTTTAGAACTACACAAGCAGATAAGGCTTCATCACTGGCTTTAGCTGCC TGGTTAGAAAAGGGTATAAGCCTTGCTAATAAAATTGATACAGAATCATTTTCGAAGGAAAAATTAAATGAGAATATTCC CAGGTTTCGTAGGATGACTAACAAAGAACCTGCCAGTTTTTATTCTGATTTGATAAGTATTTTAGCTAATTGTGGAGTTG CCTTTGTTTTGGTTCCTCATCATTTAAAAACAAACGAGGAGGAATAA
Upstream 100 bases:
>100_bases AGAATAGTCTTCAAACCGATTATAGATTCAGATAGAGATATTGAGGAGATTCCTTTGCATGAAATTAATAAAATTGAAAT TTGGGAGGTGACTGATTATC
Downstream 100 bases:
>100_bases AATGCAATTTTTAGATTTTTTAGTTAATGATATATTAAGTGAGCCAGCTGTTTTAATTGGAGTAATGACATTTATTGGTC TGGTAGCTGCTAAAAAGAAC
Product: XRE family plasmid maintenance system antidote protein
Products: NA
Alternate protein names: XRE Family Plasmid Maintenance System Antidote Protein; Plasmid Maintenance System Antidote Protein; Helix-Turn-Helix Domain-Containing Protein; Plasmid Maintenance System Antidote Protein Xre Family; Addiction Module Antidote Protein HigA Family; Addiction Module Antidote Protein; Virulence-Associated Protein I; Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTEYYPDIAIPPGETLLELIETNHMTQAELSKRIGFSKKHINEIIKGKAAITAETAIKLENIFSLPASFWINLEANYRET LARIDEKQSDEEKKIAQSIPYSEMAGYNWVPKTRKLKEKISNLRNFFRVSNLTLIFETPAYNAAFRTTQADKASSLALAA WLEKGISLANKIDTESFSKEKLNENIPRFRRMTNKEPASFYSDLISILANCGVAFVLVPHHLKTNEEE
Sequences:
>Translated_228_residues MTEYYPDIAIPPGETLLELIETNHMTQAELSKRIGFSKKHINEIIKGKAAITAETAIKLENIFSLPASFWINLEANYRET LARIDEKQSDEEKKIAQSIPYSEMAGYNWVPKTRKLKEKISNLRNFFRVSNLTLIFETPAYNAAFRTTQADKASSLALAA WLEKGISLANKIDTESFSKEKLNENIPRFRRMTNKEPASFYSDLISILANCGVAFVLVPHHLKTNEEE >Mature_227_residues TEYYPDIAIPPGETLLELIETNHMTQAELSKRIGFSKKHINEIIKGKAAITAETAIKLENIFSLPASFWINLEANYRETL ARIDEKQSDEEKKIAQSIPYSEMAGYNWVPKTRKLKEKISNLRNFFRVSNLTLIFETPAYNAAFRTTQADKASSLALAAW LEKGISLANKIDTESFSKEKLNENIPRFRRMTNKEPASFYSDLISILANCGVAFVLVPHHLKTNEEE
Specific function: Unknown
COG id: COG3093
COG function: function code R; Plasmid maintenance system antidote protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25961; Mature: 25830
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYYPDIAIPPGETLLELIETNHMTQAELSKRIGFSKKHINEIIKGKAAITAETAIKLE CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH NIFSLPASFWINLEANYRETLARIDEKQSDEEKKIAQSIPYSEMAGYNWVPKTRKLKEKI HHHHCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH SNLRNFFRVSNLTLIFETPAYNAAFRTTQADKASSLALAAWLEKGISLANKIDTESFSKE HHHHHHHHHHCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH KLNENIPRFRRMTNKEPASFYSDLISILANCGVAFVLVPHHLKTNEEE HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC >Mature Secondary Structure TEYYPDIAIPPGETLLELIETNHMTQAELSKRIGFSKKHINEIIKGKAAITAETAIKLE CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH NIFSLPASFWINLEANYRETLARIDEKQSDEEKKIAQSIPYSEMAGYNWVPKTRKLKEKI HHHHCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH SNLRNFFRVSNLTLIFETPAYNAAFRTTQADKASSLALAAWLEKGISLANKIDTESFSKE HHHHHHHHHHCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH KLNENIPRFRRMTNKEPASFYSDLISILANCGVAFVLVPHHLKTNEEE HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA