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The map label for this gene is yurN [H]

Identifier: 220932813

GI number: 220932813

Start: 2130666

End: 2131625

Strand: Reverse

Name: yurN [H]

Synonym: Hore_19790

Alternate gene names: 220932813

Gene position: 2131625-2130666 (Counterclockwise)

Preceding gene: 220932814

Following gene: 220932812

Centisome position: 82.68

GC content: 39.79

Gene sequence:

>960_bases
ATGATGCTTGCCAAAATAAGGGGTTATTTTGATAATAGTTTGATTCATCAGTTAAAGCACCGGACGGCCAAAAAGAGTTT
ACCCTATATGTTTATTTTACCGGCATTAATTGGTATGTTATTTGTCCACATCATTCCTATGTTATGGGGTGTTGTGATCA
GTTTCCTTGACCTGGATATTTACAACATAACAAGATGGGCCAGTGCTCCGTTTGTCGGTCTGGAGAATTATACTAAGGGT
TTTTCACCTGTTACAACCATTGGTAGAATGTACTTCAAAAGCCTTTTCAATGTAGCTTATTACAGTCTGTTGACGATATC
AATTGGTTATTTCCTGGGACTTGGGGCTGCATTATTACTGAACAGGCCGTTTTTCGGCAGGACATTTATCAGGGGGTTAA
TTCTTATTCCTTTTATCACTCCCGATTCCGTTGCCTATAACTTCTGGCGTTTTATCTTTCAGTCAAGGATTGGTATCCTC
AACAAAATGTTGCTGGACCTGGGTCTTATTCAAGAGAATATTGTCTGGCTGGTAGGACAGAATAGTCTTTATGCGGTTGT
AATTGCCTCTATCTGGAAAGGGTGGCCATTTGCAGCACTGATATTACTTGCCGGGTTACAGACCATACCTCAGGAAATAT
ATGAAGCAGCCAGAATTGATGGTGCATCTGCCTGGCAGAGGTTCAGGTATATTACTTTCCAGTACTTAAAACCTGTAACA
AAAACCTTAATGATTATGAATATTTTGTGGAATTTCTTTGCGTTTAACCAGTTTGTTGTACTACTTGGAAGAAGCCCCGG
AAAATATGCTGAAGTACCCAGTACATTAATAATGCGCCAGGCATTTGGACATTTCAAATACGGTCTGGGTGCTGCCCTGT
CAATAATTTTGATGTTAATTATGCTGATCATTACTATTGCTTACCTCTATTTCTTCCGTATCAGGGCAGAAAGGGAGTGA

Upstream 100 bases:

>100_bases
GAGAGGGAGTCATGTAGAAAGATTGGATAGGTGTAGAGAGTGAAGGGATAGTCATGTATTAAAGGCTGGTCAACTTAAGA
TTATTAAATAAGGAGGAAAG

Downstream 100 bases:

>100_bases
ATTAAGTGAAAAAAAGAAGATATGTATATTATTTACAGAAAACACTATTTTATTTGGCTATTTTATTCATTGTGGTAATT
GTTATGGGGCCTTATCTGTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MMLAKIRGYFDNSLIHQLKHRTAKKSLPYMFILPALIGMLFVHIIPMLWGVVISFLDLDIYNITRWASAPFVGLENYTKG
FSPVTTIGRMYFKSLFNVAYYSLLTISIGYFLGLGAALLLNRPFFGRTFIRGLILIPFITPDSVAYNFWRFIFQSRIGIL
NKMLLDLGLIQENIVWLVGQNSLYAVVIASIWKGWPFAALILLAGLQTIPQEIYEAARIDGASAWQRFRYITFQYLKPVT
KTLMIMNILWNFFAFNQFVVLLGRSPGKYAEVPSTLIMRQAFGHFKYGLGAALSIILMLIMLIITIAYLYFFRIRAERE

Sequences:

>Translated_319_residues
MMLAKIRGYFDNSLIHQLKHRTAKKSLPYMFILPALIGMLFVHIIPMLWGVVISFLDLDIYNITRWASAPFVGLENYTKG
FSPVTTIGRMYFKSLFNVAYYSLLTISIGYFLGLGAALLLNRPFFGRTFIRGLILIPFITPDSVAYNFWRFIFQSRIGIL
NKMLLDLGLIQENIVWLVGQNSLYAVVIASIWKGWPFAALILLAGLQTIPQEIYEAARIDGASAWQRFRYITFQYLKPVT
KTLMIMNILWNFFAFNQFVVLLGRSPGKYAEVPSTLIMRQAFGHFKYGLGAALSIILMLIMLIITIAYLYFFRIRAERE
>Mature_319_residues
MMLAKIRGYFDNSLIHQLKHRTAKKSLPYMFILPALIGMLFVHIIPMLWGVVISFLDLDIYNITRWASAPFVGLENYTKG
FSPVTTIGRMYFKSLFNVAYYSLLTISIGYFLGLGAALLLNRPFFGRTFIRGLILIPFITPDSVAYNFWRFIFQSRIGIL
NKMLLDLGLIQENIVWLVGQNSLYAVVIASIWKGWPFAALILLAGLQTIPQEIYEAARIDGASAWQRFRYITFQYLKPVT
KTLMIMNILWNFFAFNQFVVLLGRSPGKYAEVPSTLIMRQAFGHFKYGLGAALSIILMLIMLIITIAYLYFFRIRAERE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=262, Percent_Identity=31.2977099236641, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=29.020979020979, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1790465, Length=228, Percent_Identity=27.6315789473684, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36687; Mature: 36687

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLAKIRGYFDNSLIHQLKHRTAKKSLPYMFILPALIGMLFVHIIPMLWGVVISFLDLDI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNITRWASAPFVGLENYTKGFSPVTTIGRMYFKSLFNVAYYSLLTISIGYFLGLGAALLL
HHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRPFFGRTFIRGLILIPFITPDSVAYNFWRFIFQSRIGILNKMLLDLGLIQENIVWLVGQ
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
NSLYAVVIASIWKGWPFAALILLAGLQTIPQEIYEAARIDGASAWQRFRYITFQYLKPVT
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KTLMIMNILWNFFAFNQFVVLLGRSPGKYAEVPSTLIMRQAFGHFKYGLGAALSIILMLI
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLIITIAYLYFFRIRAERE
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMLAKIRGYFDNSLIHQLKHRTAKKSLPYMFILPALIGMLFVHIIPMLWGVVISFLDLDI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNITRWASAPFVGLENYTKGFSPVTTIGRMYFKSLFNVAYYSLLTISIGYFLGLGAALLL
HHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRPFFGRTFIRGLILIPFITPDSVAYNFWRFIFQSRIGILNKMLLDLGLIQENIVWLVGQ
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
NSLYAVVIASIWKGWPFAALILLAGLQTIPQEIYEAARIDGASAWQRFRYITFQYLKPVT
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KTLMIMNILWNFFAFNQFVVLLGRSPGKYAEVPSTLIMRQAFGHFKYGLGAALSIILMLI
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLIITIAYLYFFRIRAERE
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]