| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932796
Identifier: 220932796
GI number: 220932796
Start: 2108233
End: 2110947
Strand: Reverse
Name: 220932796
Synonym: Hore_19620
Alternate gene names: NA
Gene position: 2110947-2108233 (Counterclockwise)
Preceding gene: 220932797
Following gene: 220932795
Centisome position: 81.88
GC content: 40.22
Gene sequence:
>2715_bases ATGAGAAAAACTAACCTGGCCAGGGGTTTAATATTCTTTTTTTTGACCATAATTTTACTTTCAGGTTTTTTAAGTGACCG CTGTGAGGCAGGTATATTTGAGAGTATTATTAATGATTACTTTAATAAGACACCAGCAGATTATACAGTTAGGGATATTC CTGAAAGGGGCTGGGGTGAGGTTACCTTTCCGGACTACGGGGGAGAAAAAAGGGTCAGTGCATTTTTAAGGACTGTAGAT TCTCCCCATTTTAATGTTATTTTTGTCCATGGATACGGCCGCTCGGGAAAGTCTTATTATTTTCATGGTGTTTTTCTTAA ACATTATATTGAAAATAGTTCCCGTTATAAGTTTAATGAAATGACTATAGACCTGGCTGGATGGGGAGGTTTGGATCACA GGTTTAACGGTTTTAACGACTATTCAAATGATATCCTGGGTGCAGTAAAATATCTGGAGAGACTCTCTCCAGATATTCCC ACTATAGTGGTCGGTCACAGTCTGGGGGGATATAGTGTTTTACTGGCTGCTGCCCGGGATCAGGAAGGGTTAATTGATGG TATTATTTCTGCCTCCCCTTTTTCAGACTATATGAGGCTGGTGAGGGAGTATAGATTTGGTGATAATTATGCCTTCCCCT GGATTTTCCGGAACTTTATCGGGGTGGCTGATAAAAGACTGGACGGCTTTTTTTCTGACTATAACCTGGAAAAGCTTGTA TCTGATATCAGGGTTCCTGTTTTAATAATGTCAGGTAAGCTAGACCATCCGCCTTTTAAGTTAATGGCCTTCGATATATA TAATAAAATTCCAGGTCATAATAAACAATTATATTATTTCGATGCAAACCATTTTGGTTATTATTATTTTCAAAGCAGGC AGGTAAGGGCTGTTTTAAATAATTATTTTGATTCCATCTACCAGGGCAAAAGGCTTAATATGTTTGAAGTCCCTGTCTCG GCAAAAGTTCTGAAAAAGGCAAAAGGATATCAGGTCATGATAACTCTGGATAAAAGGATTAATAAACCCTCACCGGTCCA GGTTTGTCTGGAAAAAGATGGTGAACTTACATATAAAAAATATGTCTTTTCCCCTGACCAGAAAAGGGCTGTCTTTAATC TATCTTTTAAACCGGAAAGTTATTATGTCTTCAGGCCAGTTATAGCTGTCGTTGAGGGGAAAACATGGCACTATAGATTA AGTGATGAAGAAAAAGCCTTTGCTCGCCTCTATATATTTGAAAACAGTTCCCGGGGAGGACTTTCTGACCCCGGACCAGA AGAACAGGAAGCATTACAGGTACTAAAAAAATCTAATAAAGTCTATTACCTGGAATGGCTGGCTGAATCCCTGGCCCGAC CGCGGACCGCCCGTTATAGAGAAGCTATAGATCTTTATGAGAAAATGCTCACCATGGATGTTCATGAAAACATCAGGGTC AAATCTCTTTATAAAATATATGTAATATACCGGGATGGTTTAAAGGATAAAGGGAGGGCTGAGTTTTATTATAACAAACT CAGGGAATATGACCACCGGAAAACGCTGGTGGCAAGGGCCATTGATTATGAGAGGAATAATCTCGATTATGGAGAGAAGT CATATGTCGTTGGTGATATTAAAATAATTGGTTTGACCAGAAGCAATCAGGGGCTTATAACCAGTCAATTACCTTTCAGG ATTGGGGCTCCCTGGACCAGGGAGATTAAGGATCTAACTGAACAGCGGTTATATCATATGAACATCTTTAATCCCCTTAA CCTCAAAGTTGAAGATAAGGTTATAGAGGGGAACAAAGTTAGTGTTGTGATCAGGGTCCATGATTCTAATCCCTTTATGA TCCATCCGGGAGAGTTTGTTATCTTTAAGACAATCAATCTGGCTTCCAGTCAGTTTACCCAGAGGTTGAGAAATCCATTA GGCAATGGATTGAGTCCCTTTGTAGGGGTTAACTGGTCGGCTGAACCCTGGTGGCTTGTCGGTTTTGATTATACGGCACG ACAGGGCTGGGTAACATCCTGTGAATATATAAATTACACCAGGCGGGAGGAATTTAATAATATTAGTTTTTCGGAAAAAG GTTTTAAAACCAGTTTGAATTTTAGCAATACTCCCGCCCCTTACCGGAAGGTGGAATATTCATTAGGTTATCAGGAACAA AATTATAAAAAAGAAGATGCCTCTCCTATAGAACAGAAGTATTTAATCCCGGGGATTACACTATCTCTGGAAGAGGTGGG AAATTTAATAGTCCATCTTGATTATGCTTATTCCCCCGGGGAAGGATTTCCTGATTTCGTTCGTTCAAAATTTAAATGGC ACATTGAAAAAAAGGCCGGTCAGGGAAGACTTATATTTTCTTTTAACGGAGGGCTTTCCAGCAGCAACACCCCCTTAAAC TACCAGTTTAAAGGAGGAGGTTTTAGCAGTATTCCCCTGAGGGGACAAAGTTATGACAGGGCTGGAACCCGTTATCTATC AACCAGTGTTGAATACCATCATCCTCTTTTAAATGAGCTGGTATCGGCAATTATCTTTGTAGATGGCGGAAAGATAATTC CGGTCAGCGAAGATTTTTCCACGATAAACTGGGAGGTTGATGGTGGCCTTGGTGTTGCTATTTACACTCCTCTGGGACCT GTTAGGGCGGACCTTGGTTTTGACAGGATAGACCGCCAGACTACTTTTAATATGGGATTTGGTCATTCGTTTTAA
Upstream 100 bases:
>100_bases TAAACCGGGCTCACAAATTTAGTATAAAAATCACTTAATTGATTAAATCCCTGATTTATGGTAATATATTGGAAAATGGT TACAGAAGGTAGGGATTATT
Downstream 100 bases:
>100_bases AATAGAAATAATGTGATTGTTCCGGCCAAAGAAAGTCACCAGAGTAAAGATAACCATTCTAAAGGTGTACAGGGAGAGCA AATATGATGACACCTGTATC
Product: surface antigen (D15)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGEVTFPDYGGEKRVSAFLRTVD SPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNEMTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIP TIVVGHSLGGYSVLLAAARDQEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLNNYFDSIYQGKRLNMFEVPVS AKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKKYVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRL SDEEKAFARLYIFENSSRGGLSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDIKIIGLTRSNQGLITSQLPFR IGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKVSVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPL GNGLSPFVGVNWSAEPWWLVGFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAGQGRLIFSFNGGLSSSNTPLN YQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNELVSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGP VRADLGFDRIDRQTTFNMGFGHSF
Sequences:
>Translated_904_residues MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGEVTFPDYGGEKRVSAFLRTVD SPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNEMTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIP TIVVGHSLGGYSVLLAAARDQEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLNNYFDSIYQGKRLNMFEVPVS AKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKKYVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRL SDEEKAFARLYIFENSSRGGLSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDIKIIGLTRSNQGLITSQLPFR IGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKVSVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPL GNGLSPFVGVNWSAEPWWLVGFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAGQGRLIFSFNGGLSSSNTPLN YQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNELVSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGP VRADLGFDRIDRQTTFNMGFGHSF >Mature_904_residues MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGEVTFPDYGGEKRVSAFLRTVD SPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNEMTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIP TIVVGHSLGGYSVLLAAARDQEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLNNYFDSIYQGKRLNMFEVPVS AKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKKYVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRL SDEEKAFARLYIFENSSRGGLSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDIKIIGLTRSNQGLITSQLPFR IGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKVSVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPL GNGLSPFVGVNWSAEPWWLVGFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAGQGRLIFSFNGGLSSSNTPLN YQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNELVSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGP VRADLGFDRIDRQTTFNMGFGHSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104153; Mature: 104153
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC VTFPDYGGEKRVSAFLRTVDSPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNE EECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEE MTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIPTIVVGHSLGGYSVLLAAARD EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCC QEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV CCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLN HHCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCCEEEEEEECCHHHHHHH NYFDSIYQGKRLNMFEVPVSAKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKK HHHHHHHCCCCCCEEECCCHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCCCEEEEE YVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRLSDEEKAFARLYIFENSSRGG EEECCCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCC LSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV CCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDI EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE KIIGLTRSNQGLITSQLPFRIGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKV EEEEEEECCCCEEEECCCEEECCCHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCEE SVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPLGNGLSPFVGVNWSAEPWWLV EEEEEEECCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEE GFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ EECCCCCCCCCEEHHHCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCC NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAG CCCCCCCCCCHHHEECCCCEEEHHHHCCEEEEEEECCCCCCCCHHHHHHHHEEEEEECCC QGRLIFSFNGGLSSSNTPLNYQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNEL CCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH VSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGPVRADLGFDRIDRQTTFNMGF HHEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHCCCHHHCCCCEEEECCC GHSF CCCC >Mature Secondary Structure MRKTNLARGLIFFFLTIILLSGFLSDRCEAGIFESIINDYFNKTPADYTVRDIPERGWGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC VTFPDYGGEKRVSAFLRTVDSPHFNVIFVHGYGRSGKSYYFHGVFLKHYIENSSRYKFNE EECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEE MTIDLAGWGGLDHRFNGFNDYSNDILGAVKYLERLSPDIPTIVVGHSLGGYSVLLAAARD EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCC QEGLIDGIISASPFSDYMRLVREYRFGDNYAFPWIFRNFIGVADKRLDGFFSDYNLEKLV CCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH SDIRVPVLIMSGKLDHPPFKLMAFDIYNKIPGHNKQLYYFDANHFGYYYFQSRQVRAVLN HHCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCCEEEEEEECCHHHHHHH NYFDSIYQGKRLNMFEVPVSAKVLKKAKGYQVMITLDKRINKPSPVQVCLEKDGELTYKK HHHHHHHCCCCCCEEECCCHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCCCEEEEE YVFSPDQKRAVFNLSFKPESYYVFRPVIAVVEGKTWHYRLSDEEKAFARLYIFENSSRGG EEECCCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCC LSDPGPEEQEALQVLKKSNKVYYLEWLAESLARPRTARYREAIDLYEKMLTMDVHENIRV CCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE KSLYKIYVIYRDGLKDKGRAEFYYNKLREYDHRKTLVARAIDYERNNLDYGEKSYVVGDI EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE KIIGLTRSNQGLITSQLPFRIGAPWTREIKDLTEQRLYHMNIFNPLNLKVEDKVIEGNKV EEEEEEECCCCEEEECCCEEECCCHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCEE SVVIRVHDSNPFMIHPGEFVIFKTINLASSQFTQRLRNPLGNGLSPFVGVNWSAEPWWLV EEEEEEECCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEE GFDYTARQGWVTSCEYINYTRREEFNNISFSEKGFKTSLNFSNTPAPYRKVEYSLGYQEQ EECCCCCCCCCEEHHHCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCC NYKKEDASPIEQKYLIPGITLSLEEVGNLIVHLDYAYSPGEGFPDFVRSKFKWHIEKKAG CCCCCCCCCCHHHEECCCCEEEHHHHCCEEEEEEECCCCCCCCHHHHHHHHEEEEEECCC QGRLIFSFNGGLSSSNTPLNYQFKGGGFSSIPLRGQSYDRAGTRYLSTSVEYHHPLLNEL CCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH VSAIIFVDGGKIIPVSEDFSTINWEVDGGLGVAIYTPLGPVRADLGFDRIDRQTTFNMGF HHEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHCCCHHHCCCCEEEECCC GHSF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA