| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932708
Identifier: 220932708
GI number: 220932708
Start: 1999838
End: 2000881
Strand: Reverse
Name: 220932708
Synonym: Hore_18720
Alternate gene names: NA
Gene position: 2000881-1999838 (Counterclockwise)
Preceding gene: 220932709
Following gene: 220932707
Centisome position: 77.61
GC content: 34.29
Gene sequence:
>1044_bases GTGGGTAAAAAACAGTATGAGCAGGGGTATACTTTTCTAATAGTTATCTGGGCTTTAGTTATTCTTTCCATTATCTTTGT TAATTTATATGAGGAGGTACAACTCAATAACAGGCTCACAGAATACCGTATATTACAAAACGAACAAAAAAATATACTCT TCTCGGCTGTTAATATAGGAATCAATAAACTAAAGAGAGACAAGACAGAATATGACACCAGGAATGATAGCTGGTTAAAA CCGGTTAATAGAAAGATAAAAGGCATAAATTATAAAGTAAAGATAACTGATGTTGGAAGCAGGTTAAATATAAACTATGA TAGATTGTCTACTTTAAGGCTATTTTCATGGTGGCCTGAAAGTATTGAAAAGGATTTAAAGGGCAGGGTGATACCTGATA TACTTCTGCTGAAAGAAGTATTTGATGAAAGTTATCCAGAGGCCAGCGAACTTTTAACTACATTGGGCCAGTACAATGTA AATACTGACCGGCTTAAAGGTTTTTATATTCTTCTTATAAAATCAGGTATTCGTGATTTCCAGGCTAAATTAATTGTTGA TAGCCTCAGGAAGGTTAGAGAAGAGAAATATATAAATAAAGTTGAGCTTTTACCTGTTTATATAAAGGGGCTTGATTTAA ATACTTTTGAAAAAATTAAGCCTTTTCTGACGACAGAGGGGAGAGTTAATATTAATATGGCCCCTGAAGAGGTAGTCGAG GCAATAATAAGGTCCCTGGACATAAATCCTGATTTAAAGGAAAATTATATAAACAAGATTTTAGAATACCGGGAAGTCAG GGGTTTTAAGAATATAGACATGCTTGACAAAATAATTGCCAGGCAGGACCGATTAAAACTGGAAAAATACTTTGGTGTAA CTTCAAGTTATTTTCTAATAAAAGTAGAAGTTACCCGGGGGCCGGTTATACAGACAGCTGAAGCCCTGGTTCATCGGAGT GAAGACAGGGATAATAAAGGTTATAAAATTCGTATCTTAAGATGGTATGAAAATGTTAGTTACAGGCAGGTTAGATCACA ATAA
Upstream 100 bases:
>100_bases TTTAAATTTTGGTTTAAGAAGGATTTTTTTAAAATATATAGAATATTAATTATAAAACATGGATAATTTTTTATTTTTTT ATAAAAATGTGGTGAAAGCT
Downstream 100 bases:
>100_bases AGTGTAGAGGTGCTTTATATTGACTAAAAAGTCTTTAAACTATATTTATATTTTATTAATACTTGTATTGCTTGGTAGCA TTTTTAATTTATGGATGGTG
Product: Type II secretory pathway component PulK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MGKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIGINKLKRDKTEYDTRNDSWLK PVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPESIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNV NTDRLKGFYILLIKSGIRDFQAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLIKVEVTRGPVIQTAEALVHRS EDRDNKGYKIRILRWYENVSYRQVRSQ
Sequences:
>Translated_347_residues MGKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIGINKLKRDKTEYDTRNDSWLK PVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPESIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNV NTDRLKGFYILLIKSGIRDFQAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLIKVEVTRGPVIQTAEALVHRS EDRDNKGYKIRILRWYENVSYRQVRSQ >Mature_346_residues GKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIGINKLKRDKTEYDTRNDSWLKP VNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPESIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNVN TDRLKGFYILLIKSGIRDFQAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVEA IIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLIKVEVTRGPVIQTAEALVHRSE DRDNKGYKIRILRWYENVSYRQVRSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41003; Mature: 40872
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIG CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH INKLKRDKTEYDTRNDSWLKPVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPE HHHHHCCCHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCHHHHHHHHHHHHCHH SIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNVNTDRLKGFYILLIKSGIRDF HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEEHHCHHHH QAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHCCCEECCCEEEEECCHHHHHH AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLI HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE KVEVTRGPVIQTAEALVHRSEDRDNKGYKIRILRWYENVSYRQVRSQ EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHCCC >Mature Secondary Structure GKKQYEQGYTFLIVIWALVILSIIFVNLYEEVQLNNRLTEYRILQNEQKNILFSAVNIG CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH INKLKRDKTEYDTRNDSWLKPVNRKIKGINYKVKITDVGSRLNINYDRLSTLRLFSWWPE HHHHHCCCHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCHHHHHHHHHHHHCHH SIEKDLKGRVIPDILLLKEVFDESYPEASELLTTLGQYNVNTDRLKGFYILLIKSGIRDF HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEEHHCHHHH QAKLIVDSLRKVREEKYINKVELLPVYIKGLDLNTFEKIKPFLTTEGRVNINMAPEEVVE HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHCCCEECCCEEEEECCHHHHHH AIIRSLDINPDLKENYINKILEYREVRGFKNIDMLDKIIARQDRLKLEKYFGVTSSYFLI HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE KVEVTRGPVIQTAEALVHRSEDRDNKGYKIRILRWYENVSYRQVRSQ EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA