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The map label for this gene is 220932686

Identifier: 220932686

GI number: 220932686

Start: 1975582

End: 1976160

Strand: Reverse

Name: 220932686

Synonym: Hore_18500

Alternate gene names: NA

Gene position: 1976160-1975582 (Counterclockwise)

Preceding gene: 220932687

Following gene: 220932685

Centisome position: 76.65

GC content: 22.45

Gene sequence:

>579_bases
GTGTATTATCTATTGGCATGTTCTTATTTTAAATTAAATGAATTAGAAAAAGCAGAAGAAATGTTTTTAAAAGTAACAAA
TTTATCTGCTTATAAATCTAAATTTACTTTAGATAGTTTTTGGTGGTTAATAAATATATATGCTAAAACCAGCGATAAAG
AGAAAAAAATTAAATATTTCTTTAAGGGGTTAAAAGTTGACCCTGCATTTTATATAAAGTATAAATGGCCAGAAGGCGCT
TTTAATAAAAAGGAAGAAATATTAATTTATAATTATTTTAAAAATATTTATAGTGAAAAAGATTATTTAAATGTTACTTT
ATATAATTCTTTAATCTACTTATGTTATAGATTAAATAAAGAAAAAGAAGTAAAAGACTACATTGAAGAGATGAAAACTA
AATATAAAGAAGAGCTGGATTCGTATTACTGGGAAATAATATTTAATCTGTGGAAAAAGAGATTCAATAAAGCCAGAAAT
ATTTATAAAGAAGCTTTAAAAAAGGATAAGAACTTTTTTAAAAAATATACCTGGGAAGAGGTTGATGATAATCTACTTAG
AATATTGAAAGAATATTGA

Upstream 100 bases:

>100_bases
CTCTCTTTACAATCTTTCTAATCTTTTTTATATAAATAAAAACTATAAAAAAGCTGCCTTTTATCTAGAAAAATCTATTG
AAACGAAAAAAACGATAAAA

Downstream 100 bases:

>100_bases
CCTTGAATCAGTATTTATCAGATGAAGTCATATTAAGTTAGGAAACTTAACACTTTTTCAATAATAAATATACTGTTATT
TTTGTATTATTAATTATCTT

Product: pentatricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MYYLLACSYFKLNELEKAEEMFLKVTNLSAYKSKFTLDSFWWLINIYAKTSDKEKKIKYFFKGLKVDPAFYIKYKWPEGA
FNKKEEILIYNYFKNIYSEKDYLNVTLYNSLIYLCYRLNKEKEVKDYIEEMKTKYKEELDSYYWEIIFNLWKKRFNKARN
IYKEALKKDKNFFKKYTWEEVDDNLLRILKEY

Sequences:

>Translated_192_residues
MYYLLACSYFKLNELEKAEEMFLKVTNLSAYKSKFTLDSFWWLINIYAKTSDKEKKIKYFFKGLKVDPAFYIKYKWPEGA
FNKKEEILIYNYFKNIYSEKDYLNVTLYNSLIYLCYRLNKEKEVKDYIEEMKTKYKEELDSYYWEIIFNLWKKRFNKARN
IYKEALKKDKNFFKKYTWEEVDDNLLRILKEY
>Mature_192_residues
MYYLLACSYFKLNELEKAEEMFLKVTNLSAYKSKFTLDSFWWLINIYAKTSDKEKKIKYFFKGLKVDPAFYIKYKWPEGA
FNKKEEILIYNYFKNIYSEKDYLNVTLYNSLIYLCYRLNKEKEVKDYIEEMKTKYKEELDSYYWEIIFNLWKKRFNKARN
IYKEALKKDKNFFKKYTWEEVDDNLLRILKEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23960; Mature: 23960

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYLLACSYFKLNELEKAEEMFLKVTNLSAYKSKFTLDSFWWLINIYAKTSDKEKKIKYF
CEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
FKGLKVDPAFYIKYKWPEGAFNKKEEILIYNYFKNIYSEKDYLNVTLYNSLIYLCYRLNK
HHCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCC
EKEVKDYIEEMKTKYKEELDSYYWEIIFNLWKKRFNKARNIYKEALKKDKNFFKKYTWEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VDDNLLRILKEY
HHHHHHHHHHCC
>Mature Secondary Structure
MYYLLACSYFKLNELEKAEEMFLKVTNLSAYKSKFTLDSFWWLINIYAKTSDKEKKIKYF
CEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
FKGLKVDPAFYIKYKWPEGAFNKKEEILIYNYFKNIYSEKDYLNVTLYNSLIYLCYRLNK
HHCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCC
EKEVKDYIEEMKTKYKEELDSYYWEIIFNLWKKRFNKARNIYKEALKKDKNFFKKYTWEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VDDNLLRILKEY
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA