| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932687
Identifier: 220932687
GI number: 220932687
Start: 1976360
End: 1976941
Strand: Reverse
Name: 220932687
Synonym: Hore_18510
Alternate gene names: NA
Gene position: 1976941-1976360 (Counterclockwise)
Preceding gene: 220932688
Following gene: 220932686
Centisome position: 76.68
GC content: 19.42
Gene sequence:
>582_bases ATGATTATTAGGGGTGATTATATGAAAAAAATAATTTTTGTAAGTAGTATCTTTATCATTTATCAATTATTACAAATATT TCAACTCATTAATTTGTTGACCCTGAATTTTTATTTATATTTATTACATCCTTTATATGTTATAGCATGGGTTATAATAT TAACTTCATATAAAGATAACATAATTAAACCGGGTTATTTCTATGTTCTCATTTTTATTATGATGATTCTTTTAATTATA AATATATACATAAATGAAAAACAAATATTAAATATAAATACATATCAGATATTATTACTGATGTATATATTTATTGATTT GTATATAACAAAAGATTTTAATCATTTAAAAAAAGAATTAGATACCAAGCACTTAGCAATTACGGTAAGACACAAAAATT CATTAAAGTTAAAATACTTTAATTATTATTTCTATTTTAAAGCAAAGGTTTGTTATATAGGTAAAAAATACCGAAAAACA ATCATATATTTAAAAATAGCTAGCTTGATAAATATGTTTAATAAGGACATGTTATTAAAAGCTAGCTTACATATTTGTAG ATTTAGCTTATGTTTATTATAA
Upstream 100 bases:
>100_bases TGAGAGCCCCCATTTTTTTGGGGATTTCCAAAATTTACTAGATGGTGTTTATTAAATGGTTAGACTATATCAATAAAAAA TTTAAAAAGTTTTATGTAAT
Downstream 100 bases:
>100_bases AAAAAATTATATTAATAAGAGTATATTAAACTACAAAAAAGCAATTAATTATTTTGAAAAGAGTAATATAAATATTGCAA ATTTGGATGCTTATTCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MIIRGDYMKKIIFVSSIFIIYQLLQIFQLINLLTLNFYLYLLHPLYVIAWVIILTSYKDNIIKPGYFYVLIFIMMILLII NIYINEKQILNINTYQILLLMYIFIDLYITKDFNHLKKELDTKHLAITVRHKNSLKLKYFNYYFYFKAKVCYIGKKYRKT IIYLKIASLINMFNKDMLLKASLHICRFSLCLL
Sequences:
>Translated_193_residues MIIRGDYMKKIIFVSSIFIIYQLLQIFQLINLLTLNFYLYLLHPLYVIAWVIILTSYKDNIIKPGYFYVLIFIMMILLII NIYINEKQILNINTYQILLLMYIFIDLYITKDFNHLKKELDTKHLAITVRHKNSLKLKYFNYYFYFKAKVCYIGKKYRKT IIYLKIASLINMFNKDMLLKASLHICRFSLCLL >Mature_193_residues MIIRGDYMKKIIFVSSIFIIYQLLQIFQLINLLTLNFYLYLLHPLYVIAWVIILTSYKDNIIKPGYFYVLIFIMMILLII NIYINEKQILNINTYQILLLMYIFIDLYITKDFNHLKKELDTKHLAITVRHKNSLKLKYFNYYFYFKAKVCYIGKKYRKT IIYLKIASLINMFNKDMLLKASLHICRFSLCLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23380; Mature: 23380
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRGDYMKKIIFVSSIFIIYQLLQIFQLINLLTLNFYLYLLHPLYVIAWVIILTSYKDN CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IIKPGYFYVLIFIMMILLIINIYINEKQILNINTYQILLLMYIFIDLYITKDFNHLKKEL CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHC DTKHLAITVRHKNSLKLKYFNYYFYFKAKVCYIGKKYRKTIIYLKIASLINMFNKDMLLK CCCEEEEEEEECCCEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHH ASLHICRFSLCLL HHHHHHHHHHHCC >Mature Secondary Structure MIIRGDYMKKIIFVSSIFIIYQLLQIFQLINLLTLNFYLYLLHPLYVIAWVIILTSYKDN CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IIKPGYFYVLIFIMMILLIINIYINEKQILNINTYQILLLMYIFIDLYITKDFNHLKKEL CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHC DTKHLAITVRHKNSLKLKYFNYYFYFKAKVCYIGKKYRKTIIYLKIASLINMFNKDMLLK CCCEEEEEEEECCCEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHH ASLHICRFSLCLL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA