| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqhQ [H]
Identifier: 220932634
GI number: 220932634
Start: 1922676
End: 1923557
Strand: Reverse
Name: yqhQ [H]
Synonym: Hore_17980
Alternate gene names: 220932634
Gene position: 1923557-1922676 (Counterclockwise)
Preceding gene: 220932635
Following gene: 220932633
Centisome position: 74.61
GC content: 40.82
Gene sequence:
>882_bases ATGAGTGAACCACAATACGGTGGTCAGGCTGTTATTGAAGGTGTAATGATGAGAGGTAAGGACAGGGCAGCCATAGCTGT CCGTAAACCTACGGATGAAATTGTTGTGGAAAGAATCCACCTCAGGTCCATCGGGGAAAGGTTTCCCTTTTTAAAATGGC CATTTATTAGAGGTGTTGTTGCCCTTATCAGTTCATTGACGATTGGTGTTAAATCTTTAACCTATTCTGCAAATGAGGCC ACAGAGGAAGAGGAGGAAATCTCTCCCTGGGAAATGGCCCTGAGTGTTGTTATATCCTTTGCCCTGGCTATTTTGCTTTT TGTCGCTTTTCCAGCCGGGGTTATTGCTTTGATTCAGCCACTGGTTGAACAGAGTATAGTTCTGAATATTATAGAGGGAC TGGTTAAGATAACTGCTTTTTTGACTTATCTTTTTATTATTTCAAGAATGAAAGAAGTTAAAAGGGTATTTATGTATCAC GGGGCTGAACACAAGGTTATTCATAATTATGAATCAAATTTACCCCTTACTGTGGAAAATGCCCGTAAATTCAGTACCCT TCATCCCAGGTGTGGGACCAACTTTATTTTTCTGGTGATTTTGTTGAGTATATTTTTCTTTTCATTTTTTGGCCGGCCTC CTTTTCTGGAAAGGATCTTATACCATTTATTACTTCTGCCGATTATTGCCGGGGTATCCTATGAGATAATTAAACTGGCT GGTCGTGATAAGGTTAATCCCTTTATCCGTTGTATTGCTACCCCGGGACTGTGGCTGCAAAAATTAACGACAGTCGAACC AGATGATTCTATGCTAGAGGTTGCTATCGCTGCCCTTAAGGCAGTATTACCAGAAGAAGAAAGGAATGGGTCAAATGTTT GA
Upstream 100 bases:
>100_bases GCTTCTTACGATGATCCCGTAATTATGGTTGGGGCTGAAGAGGTATATGAAGCCCGTTGTCGAAAATGCCATGAAGTAAA GAATAAAAGGGGAGAAAAGA
Downstream 100 bases:
>100_bases TTTAACGAAAAAACTTGATAAATTAGTCGATAGATATAATGAACTTAACAAAGAAATCAGTGACCCTGATGTTATTAATA ACAGTGAACAGTATCAAAAA
Product: putative metal-dependent enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSEPQYGGQAVIEGVMMRGKDRAAIAVRKPTDEIVVERIHLRSIGERFPFLKWPFIRGVVALISSLTIGVKSLTYSANEA TEEEEEISPWEMALSVVISFALAILLFVAFPAGVIALIQPLVEQSIVLNIIEGLVKITAFLTYLFIISRMKEVKRVFMYH GAEHKVIHNYESNLPLTVENARKFSTLHPRCGTNFIFLVILLSIFFFSFFGRPPFLERILYHLLLLPIIAGVSYEIIKLA GRDKVNPFIRCIATPGLWLQKLTTVEPDDSMLEVAIAALKAVLPEEERNGSNV
Sequences:
>Translated_293_residues MSEPQYGGQAVIEGVMMRGKDRAAIAVRKPTDEIVVERIHLRSIGERFPFLKWPFIRGVVALISSLTIGVKSLTYSANEA TEEEEEISPWEMALSVVISFALAILLFVAFPAGVIALIQPLVEQSIVLNIIEGLVKITAFLTYLFIISRMKEVKRVFMYH GAEHKVIHNYESNLPLTVENARKFSTLHPRCGTNFIFLVILLSIFFFSFFGRPPFLERILYHLLLLPIIAGVSYEIIKLA GRDKVNPFIRCIATPGLWLQKLTTVEPDDSMLEVAIAALKAVLPEEERNGSNV >Mature_292_residues SEPQYGGQAVIEGVMMRGKDRAAIAVRKPTDEIVVERIHLRSIGERFPFLKWPFIRGVVALISSLTIGVKSLTYSANEAT EEEEEISPWEMALSVVISFALAILLFVAFPAGVIALIQPLVEQSIVLNIIEGLVKITAFLTYLFIISRMKEVKRVFMYHG AEHKVIHNYESNLPLTVENARKFSTLHPRCGTNFIFLVILLSIFFFSFFGRPPFLERILYHLLLLPIIAGVSYEIIKLAG RDKVNPFIRCIATPGLWLQKLTTVEPDDSMLEVAIAALKAVLPEEERNGSNV
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 32914; Mature: 32783
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPQYGGQAVIEGVMMRGKDRAAIAVRKPTDEIVVERIHLRSIGERFPFLKWPFIRGVV CCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ALISSLTIGVKSLTYSANEATEEEEEISPWEMALSVVISFALAILLFVAFPAGVIALIQP HHHHHHHHHHHHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVEQSIVLNIIEGLVKITAFLTYLFIISRMKEVKRVFMYHGAEHKVIHNYESNLPLTVEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEECC ARKFSTLHPRCGTNFIFLVILLSIFFFSFFGRPPFLERILYHLLLLPIIAGVSYEIIKLA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHC GRDKVNPFIRCIATPGLWLQKLTTVEPDDSMLEVAIAALKAVLPEEERNGSNV CCCCCCHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SEPQYGGQAVIEGVMMRGKDRAAIAVRKPTDEIVVERIHLRSIGERFPFLKWPFIRGVV CCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ALISSLTIGVKSLTYSANEATEEEEEISPWEMALSVVISFALAILLFVAFPAGVIALIQP HHHHHHHHHHHHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVEQSIVLNIIEGLVKITAFLTYLFIISRMKEVKRVFMYHGAEHKVIHNYESNLPLTVEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEECC ARKFSTLHPRCGTNFIFLVILLSIFFFSFFGRPPFLERILYHLLLLPIIAGVSYEIIKLA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHC GRDKVNPFIRCIATPGLWLQKLTTVEPDDSMLEVAIAALKAVLPEEERNGSNV CCCCCCHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]