Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932578

Identifier: 220932578

GI number: 220932578

Start: 1860985

End: 1861674

Strand: Reverse

Name: 220932578

Synonym: Hore_17420

Alternate gene names: NA

Gene position: 1861674-1860985 (Counterclockwise)

Preceding gene: 220932579

Following gene: 220932577

Centisome position: 72.21

GC content: 31.45

Gene sequence:

>690_bases
ATGTCTTTATTTAAAAAAAGTAACCTGTATATTCTGCCTTTTATCTTAATATTGTTGATGGGGATAACTTTTGCTGCCCG
GGGAGAAGCAGAGATAACAGGCAGTATTGAAAATGGAACAAAAAGAAATATCGACCTGGAAATAGATGATGGTAAAAAGA
TTAAAGAATTGGATGATAGAAATTTTTATAATCTCTGCTGGGTAAAGTATAAAAAAGAACTGGAATCCGGAGATTATTAT
TATATTAAACTGGAATATTATAAAAACAAATATATGGATAAGACTTATTATAATAATAAAACCTTGAATATCTGGGGTGT
TTATTCGTGGGAAATCAATAAAAGATTAACAAATAAATATGAAGTAAATTTTAAGGACAAAAACTATTATATCGAAGATT
ACGAGTATAAATCCTACCTGGGGGCAAAATTGAAATGTGAATTTGATTATGAGCTCAATGATAGACATGAATATTCAGCC
TATATACAGAGGTACTGGGAGGATAATAAAACAACAGATGATAGAGATAATGTGTCTGATACTCTGTCTGTTACCTGGGA
TTATGAAGTAAATTCAAAAACAGAGTTAACAACAAATATCAAGTTATGGCAGGAGGAACATCCCTGGGAGTCGAGTTCCA
CCAATAAATATGAGAAGACCATGTCTGTGGGGTTTGAGTATGAACTTTAA

Upstream 100 bases:

>100_bases
AAAAAAGAAAAGCATATTTATGCTTTTTAAAAAAGTGAGGTGAACAGGAGATAAACCAAGGGTATAAAAATATACGAAAA
ATGGAGGAATTAAAACGAAA

Downstream 100 bases:

>100_bases
ACCACAAAAAGATAATATACAACCAGAATCCTGGCTGGAATAAGTTCAGTCAGGATTTTTTTATTTATCTTTTTAACGTC
ATAGACTTCATATGTGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDRNFYNLCWVKYKKELESGDYY
YIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKYEVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSA
YIQRYWEDNKTTDDRDNVSDTLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL

Sequences:

>Translated_229_residues
MSLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDRNFYNLCWVKYKKELESGDYY
YIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKYEVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSA
YIQRYWEDNKTTDDRDNVSDTLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL
>Mature_228_residues
SLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDRNFYNLCWVKYKKELESGDYYY
IKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKYEVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSAY
IQRYWEDNKTTDDRDNVSDTLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27795; Mature: 27664

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDR
CCCCCCCCEEEHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEEECCCCCCHHCCCC
NFYNLCWVKYKKELESGDYYYIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKY
CCEEEEEEEEEHHCCCCCEEEEEEEEECCCCCCCEEECCCEEEEEEEEEEEECCCCCCEE
EVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSAYIQRYWEDNKTTDDRDNVSD
EEEEECCCEEEECCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
TLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL
EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCHHHHEEECEEECC
>Mature Secondary Structure 
SLFKKSNLYILPFILILLMGITFAARGEAEITGSIENGTKRNIDLEIDDGKKIKELDDR
CCCCCCCEEEHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEEECCCCCCHHCCCC
NFYNLCWVKYKKELESGDYYYIKLEYYKNKYMDKTYYNNKTLNIWGVYSWEINKRLTNKY
CCEEEEEEEEEHHCCCCCEEEEEEEEECCCCCCCEEECCCEEEEEEEEEEEECCCCCCEE
EVNFKDKNYYIEDYEYKSYLGAKLKCEFDYELNDRHEYSAYIQRYWEDNKTTDDRDNVSD
EEEEECCCEEEECCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
TLSVTWDYEVNSKTELTTNIKLWQEEHPWESSSTNKYEKTMSVGFEYEL
EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCHHHHEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA