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The map label for this gene is yvyF [H]

Identifier: 220932553

GI number: 220932553

Start: 1833087

End: 1833521

Strand: Reverse

Name: yvyF [H]

Synonym: Hore_17170

Alternate gene names: 220932553

Gene position: 1833521-1833087 (Counterclockwise)

Preceding gene: 220932554

Following gene: 220932552

Centisome position: 71.12

GC content: 42.07

Gene sequence:

>435_bases
ATGAACTTAAAGAATTGCCCCAAATGCGGGAAGTTATTTGCAGTCCAGGGTAGTGAAAAAATATGTCCGGTCTGTAAAAA
AGAAGAAGAAGATGACTTTCAAAAGGTAAAGGAATACCTATGGGACAACCCCGGGGCTACTATTGAAGAAGTTCATGAAG
AAACAGGGGTAGAACGGGAAACCATTATTAAATTTGTTAAAGAAGACCGGTTGATTGCTGAAGGACTGGATTTAGAAATC
CTTCTGGAGTGTGAACGTTGTGGTGATCCTATAACCCACGGGCGGTTCTGTGAAAAGTGTCAGCAGGAGCTGGTTGAGGG
TTTAAGCCCTACCCCCAGGAAGAAAAAGAAACCCAGAAAAAAAACAAAGCGGACCAGGGACAAAATGTTTATTGCTGACC
GTGTTGTTAAGAGAAAGAAGAATACTGACCAATAG

Upstream 100 bases:

>100_bases
AGAAAGGTACATAAAGTTATAATAATTCAGGGTCATTTGGTCATTCAAAAATGATTATTAGAAATTTTCTCTCGTATAGA
GGGATCAGGAGGGGAGAGTA

Downstream 100 bases:

>100_bases
AAAGCCGGTTTATGGTTTTCAGCCTACCAAAATAACTAACTTTTTTTATCGGTAGTATGCTGAAGGGCCATAACTGGCTT
TTTTTAATGTCCGGGACAAT

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNLKNCPKCGKLFAVQGSEKICPVCKKEEEDDFQKVKEYLWDNPGATIEEVHEETGVERETIIKFVKEDRLIAEGLDLEI
LLECERCGDPITHGRFCEKCQQELVEGLSPTPRKKKKPRKKTKRTRDKMFIADRVVKRKKNTDQ

Sequences:

>Translated_144_residues
MNLKNCPKCGKLFAVQGSEKICPVCKKEEEDDFQKVKEYLWDNPGATIEEVHEETGVERETIIKFVKEDRLIAEGLDLEI
LLECERCGDPITHGRFCEKCQQELVEGLSPTPRKKKKPRKKTKRTRDKMFIADRVVKRKKNTDQ
>Mature_144_residues
MNLKNCPKCGKLFAVQGSEKICPVCKKEEEDDFQKVKEYLWDNPGATIEEVHEETGVERETIIKFVKEDRLIAEGLDLEI
LLECERCGDPITHGRFCEKCQQELVEGLSPTPRKKKKPRKKTKRTRDKMFIADRVVKRKKNTDQ

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022258 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16766; Mature: 16766

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKNCPKCGKLFAVQGSEKICPVCKKEEEDDFQKVKEYLWDNPGATIEEVHEETGVERE
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
TIIKFVKEDRLIAEGLDLEILLECERCGDPITHGRFCEKCQQELVEGLSPTPRKKKKPRK
HHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHH
KTKRTRDKMFIADRVVKRKKNTDQ
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLKNCPKCGKLFAVQGSEKICPVCKKEEEDDFQKVKEYLWDNPGATIEEVHEETGVERE
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
TIIKFVKEDRLIAEGLDLEILLECERCGDPITHGRFCEKCQQELVEGLSPTPRKKKKPRK
HHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHH
KTKRTRDKMFIADRVVKRKKNTDQ
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]