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The map label for this gene is 220932554

Identifier: 220932554

GI number: 220932554

Start: 1833676

End: 1834704

Strand: Reverse

Name: 220932554

Synonym: Hore_17180

Alternate gene names: NA

Gene position: 1834704-1833676 (Counterclockwise)

Preceding gene: 220932555

Following gene: 220932553

Centisome position: 71.16

GC content: 36.35

Gene sequence:

>1029_bases
ATGGAACTGAGTAGAAGGACCATAAAAAGGGGTATAATTCTATCAGTAAGTGTCAGTATTGTAGCCCTGATACTGGTAAT
GGTATTAACCCAGAATGAACTTACTTTTAAATCCTTTAGTAGAGTAAACACTGTTTATCTGGTAATAGCTACCTTAATAA
TGCTGACCTTCTGGATTTTAAAGGCGTTAAAACTCAAGGTTTTAACCCATGTGCTTGGGGGAAAGGTTTCAACTTATAAA
GTCTTTACCATTTACCTGGCCAGTGCTTTTGTGTCTCATGTTACCCCTTCTACTTCAGGTGGGCTGCCATTTCAGATATA
TTTTTTACACCGTGAGGGTTTACCCCTGGGGAAAACTACAGCCCTGACTGTCCTTGATGGAATAATAACTTTTTTATTTT
TTATAATAGCAACCCCCTTTTTACTGCTCCTCTGGGGTGAATATTTAAATCTTGGACCTAAAATTGCAGGTCTTTTTCAT
ATTGCCATGTGGCTTGTTATTTTATTTATTGTCATCAGCTTTATTCTCATTTTTAATGCCAGTAAGGCCAAGGTTTTTGT
CAACTGGCTGGTTAATCTCAGGTGGGTTAAAAAATATTTTAAAGATGAAACCCTACTTAAATTTAAAAACTTTATTGAAA
AAGAAGTAGATTATTTTAATGAAGGAATAAAGATATTATTTAAGAATAAACGGGATATGTTTCTGGTCATTTTCTATACC
ATATTATACTGGTTTTTTTATTTGAGCCTGGCCCCTGTTTTGCTACTGGGACTCGGTATCAAGATAGCAATCCCACCCAT
TATTCTGGCCCAGCTAGTCTTTAATTTTATTCAACCCGTAATCCCGACTCCAGGGGGAAGTGGGGGAGCTGAACTCGGCT
TTGCTTATTTATTTAAGTTTATGGTCCCCAATTATTTACTCGGTATATTTGTGGCTATCTGGAGGTTTTTTATGTTTTAC
TCCAGTTTAATAGTGGGTGGTTTATATTTTATTAAACTGGTTAGGGGGACGGACTACCTGGAAAAATAG

Upstream 100 bases:

>100_bases
TCTGGTCGAAAAACTGGACGATGACTTCCGCAGACATATAAAACATTTTGATGATTTTGTTCGTTATATCTGTGTTATAA
AATAAATTGGAGTGAAGTTC

Downstream 100 bases:

>100_bases
GGTAGTTTGATAGATTTTGTGATTACTGATATAATTAAAGTAAGATAAAGGTAAAGAAAGGTACATAAAGTTATAATAAT
TCAGGGTCATTTGGTCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MELSRRTIKRGIILSVSVSIVALILVMVLTQNELTFKSFSRVNTVYLVIATLIMLTFWILKALKLKVLTHVLGGKVSTYK
VFTIYLASAFVSHVTPSTSGGLPFQIYFLHREGLPLGKTTALTVLDGIITFLFFIIATPFLLLLWGEYLNLGPKIAGLFH
IAMWLVILFIVISFILIFNASKAKVFVNWLVNLRWVKKYFKDETLLKFKNFIEKEVDYFNEGIKILFKNKRDMFLVIFYT
ILYWFFYLSLAPVLLLGLGIKIAIPPIILAQLVFNFIQPVIPTPGGSGGAELGFAYLFKFMVPNYLLGIFVAIWRFFMFY
SSLIVGGLYFIKLVRGTDYLEK

Sequences:

>Translated_342_residues
MELSRRTIKRGIILSVSVSIVALILVMVLTQNELTFKSFSRVNTVYLVIATLIMLTFWILKALKLKVLTHVLGGKVSTYK
VFTIYLASAFVSHVTPSTSGGLPFQIYFLHREGLPLGKTTALTVLDGIITFLFFIIATPFLLLLWGEYLNLGPKIAGLFH
IAMWLVILFIVISFILIFNASKAKVFVNWLVNLRWVKKYFKDETLLKFKNFIEKEVDYFNEGIKILFKNKRDMFLVIFYT
ILYWFFYLSLAPVLLLGLGIKIAIPPIILAQLVFNFIQPVIPTPGGSGGAELGFAYLFKFMVPNYLLGIFVAIWRFFMFY
SSLIVGGLYFIKLVRGTDYLEK
>Mature_342_residues
MELSRRTIKRGIILSVSVSIVALILVMVLTQNELTFKSFSRVNTVYLVIATLIMLTFWILKALKLKVLTHVLGGKVSTYK
VFTIYLASAFVSHVTPSTSGGLPFQIYFLHREGLPLGKTTALTVLDGIITFLFFIIATPFLLLLWGEYLNLGPKIAGLFH
IAMWLVILFIVISFILIFNASKAKVFVNWLVNLRWVKKYFKDETLLKFKNFIEKEVDYFNEGIKILFKNKRDMFLVIFYT
ILYWFFYLSLAPVLLLGLGIKIAIPPIILAQLVFNFIQPVIPTPGGSGGAELGFAYLFKFMVPNYLLGIFVAIWRFFMFY
SSLIVGGLYFIKLVRGTDYLEK

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 39077; Mature: 39077

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSRRTIKRGIILSVSVSIVALILVMVLTQNELTFKSFSRVNTVYLVIATLIMLTFWIL
CCCCHHHHHCCHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALKLKVLTHVLGGKVSTYKVFTIYLASAFVSHVTPSTSGGLPFQIYFLHREGLPLGKTT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHH
ALTVLDGIITFLFFIIATPFLLLLWGEYLNLGPKIAGLFHIAMWLVILFIVISFILIFNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKAKVFVNWLVNLRWVKKYFKDETLLKFKNFIEKEVDYFNEGIKILFKNKRDMFLVIFYT
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHH
ILYWFFYLSLAPVLLLGLGIKIAIPPIILAQLVFNFIQPVIPTPGGSGGAELGFAYLFKF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
MVPNYLLGIFVAIWRFFMFYSSLIVGGLYFIKLVRGTDYLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MELSRRTIKRGIILSVSVSIVALILVMVLTQNELTFKSFSRVNTVYLVIATLIMLTFWIL
CCCCHHHHHCCHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALKLKVLTHVLGGKVSTYKVFTIYLASAFVSHVTPSTSGGLPFQIYFLHREGLPLGKTT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHH
ALTVLDGIITFLFFIIATPFLLLLWGEYLNLGPKIAGLFHIAMWLVILFIVISFILIFNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKAKVFVNWLVNLRWVKKYFKDETLLKFKNFIEKEVDYFNEGIKILFKNKRDMFLVIFYT
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHH
ILYWFFYLSLAPVLLLGLGIKIAIPPIILAQLVFNFIQPVIPTPGGSGGAELGFAYLFKF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
MVPNYLLGIFVAIWRFFMFYSSLIVGGLYFIKLVRGTDYLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]