| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932552
Identifier: 220932552
GI number: 220932552
Start: 1832504
End: 1832770
Strand: Reverse
Name: 220932552
Synonym: Hore_17160
Alternate gene names: NA
Gene position: 1832770-1832504 (Counterclockwise)
Preceding gene: 220932553
Following gene: 220932551
Centisome position: 71.09
GC content: 39.7
Gene sequence:
>267_bases GTGCGGGTAAATGAGACACAGGGTCAGAAAATAAGCCAGTTATATATAGAAAAGAAAAAAGAAGTTAATAAGAAGAATAA GATGGCGCGTAAAGACAAAATAACCATTTCTAATAAGGGTATCAAGGTCTCCGAAATAAAACAGGAACTGGCCCGGATTC CTGATGTCAGGAAGAGGAAAATAGAGTCCCTGAAAAGGCAGATTCAGGAGGGCAATTACAGGGTTCCGGCCCGGGAAATT GCCAGAAAGTTAACTGAAAATATTTAA
Upstream 100 bases:
>100_bases ATATTGCATAAATAATTGATATCCTATATATGAACCTGGGTTATAGTTATATTATGCAAAATGAATTTTTATAGATAATA AAATATTGGTGGTGATATAA
Downstream 100 bases:
>100_bases AATGTATTCTGGAGTGAGGCAATTGCTATATGAAAATTTCCTAAATCTATTTAAAAAAGAATATGAACTTTATTGCCAGC TACAAGATATGGCTGAAAGG
Product: Anti-sigma-28 factor FlgM family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MRVNETQGQKISQLYIEKKKEVNKKNKMARKDKITISNKGIKVSEIKQELARIPDVRKRKIESLKRQIQEGNYRVPAREI ARKLTENI
Sequences:
>Translated_88_residues MRVNETQGQKISQLYIEKKKEVNKKNKMARKDKITISNKGIKVSEIKQELARIPDVRKRKIESLKRQIQEGNYRVPAREI ARKLTENI >Mature_88_residues MRVNETQGQKISQLYIEKKKEVNKKNKMARKDKITISNKGIKVSEIKQELARIPDVRKRKIESLKRQIQEGNYRVPAREI ARKLTENI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10403; Mature: 10403
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVNETQGQKISQLYIEKKKEVNKKNKMARKDKITISNKGIKVSEIKQELARIPDVRKRK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCHHHHH IESLKRQIQEGNYRVPAREIARKLTENI HHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MRVNETQGQKISQLYIEKKKEVNKKNKMARKDKITISNKGIKVSEIKQELARIPDVRKRK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCHHHHH IESLKRQIQEGNYRVPAREIARKLTENI HHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA