Click here to switch to the map view.

The map label for this gene is 220932478

Identifier: 220932478

GI number: 220932478

Start: 1764660

End: 1765352

Strand: Reverse

Name: 220932478

Synonym: Hore_16420

Alternate gene names: NA

Gene position: 1765352-1764660 (Counterclockwise)

Preceding gene: 220932479

Following gene: 220932477

Centisome position: 68.47

GC content: 40.26

Gene sequence:

>693_bases
ATGAGGAGAAGAGGGTATTTTCTTGAAACATTGATTTTTCTGCTGGTTTTACTGGTGGTAACCCAGGTATTCTTGCCCGG
GCTTGCTGAGAAAAAGATTAAGGAAGCCTTTAAACAGCGGGTTGATGGAGTTGAAAGCCTCAGGGTCAACCTCGGGGCTT
TTCCTGCCCTTAAGCTGGTTATTAAACGGGCAGACTGGGTTGAAGTCAGGGGTACCAATCTCATAGTTAACAACCTTCCG
GTCACATCATTTAAAAGCTATATTGAAGATGTCAGGGTAACTGACGGTGAAATCAGGGGTAGTAATACTGATTTAAATAT
AAAAATTACTGAGGAAGATATTAATAAATTTATTCAAAAGAACTATCCTTCACTCAATAATTTTACCATTAAACTCCTAC
CTGGCCAGGTATTTATGTCTGGTAAGGTGGGATTTATAAATATTAAGCTGACCGGTAAGTTTCAGGTTGCAAAGGTAAAC
CGGGTTAGTTTTGTACCGACCGGTATCCAGATTGAGGAACTTCAGCTTTCCTCTGAAGCCATTGCCGAGGTTATAAATGA
TAAAGAGTTTTCCTTTGATTTCAGGGGACTGGGGTTACCGGTTAAAGTGGAAGAGGTTTTAATTAAATCTGGTGAAGTAG
AAATTAACGGTGGTAAATCGGTGAGAAAGGCGGTATCCTCATGGAAGGATTAA

Upstream 100 bases:

>100_bases
AGGTAATGTCCAGAAGGTGATGGATGGTTATATTGATGAGTTTATTGAGGCCTATCTGAAGACGGGTAATAAAGGCAGGG
AATAATGAAGGGAGCTGGAT

Downstream 100 bases:

>100_bases
AAAAATACCAGAAAATGATGTTTGTATTTTTGGCGGTAATAGTTATTATTACCCTGATAAGTTCGGGAGAACGTTATCGT
GTCGAAAGAAATAATACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRRRGYFLETLIFLLVLLVVTQVFLPGLAEKKIKEAFKQRVDGVESLRVNLGAFPALKLVIKRADWVEVRGTNLIVNNLP
VTSFKSYIEDVRVTDGEIRGSNTDLNIKITEEDINKFIQKNYPSLNNFTIKLLPGQVFMSGKVGFINIKLTGKFQVAKVN
RVSFVPTGIQIEELQLSSEAIAEVINDKEFSFDFRGLGLPVKVEEVLIKSGEVEINGGKSVRKAVSSWKD

Sequences:

>Translated_230_residues
MRRRGYFLETLIFLLVLLVVTQVFLPGLAEKKIKEAFKQRVDGVESLRVNLGAFPALKLVIKRADWVEVRGTNLIVNNLP
VTSFKSYIEDVRVTDGEIRGSNTDLNIKITEEDINKFIQKNYPSLNNFTIKLLPGQVFMSGKVGFINIKLTGKFQVAKVN
RVSFVPTGIQIEELQLSSEAIAEVINDKEFSFDFRGLGLPVKVEEVLIKSGEVEINGGKSVRKAVSSWKD
>Mature_230_residues
MRRRGYFLETLIFLLVLLVVTQVFLPGLAEKKIKEAFKQRVDGVESLRVNLGAFPALKLVIKRADWVEVRGTNLIVNNLP
VTSFKSYIEDVRVTDGEIRGSNTDLNIKITEEDINKFIQKNYPSLNNFTIKLLPGQVFMSGKVGFINIKLTGKFQVAKVN
RVSFVPTGIQIEELQLSSEAIAEVINDKEFSFDFRGLGLPVKVEEVLIKSGEVEINGGKSVRKAVSSWKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25833; Mature: 25833

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRGYFLETLIFLLVLLVVTQVFLPGLAEKKIKEAFKQRVDGVESLRVNLGAFPALKLV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHH
IKRADWVEVRGTNLIVNNLPVTSFKSYIEDVRVTDGEIRGSNTDLNIKITEEDINKFIQK
HHCCCEEEECCCEEEEECCCHHHHHHHHHHHCCCCCEEECCCCEEEEEEEHHHHHHHHHH
NYPSLNNFTIKLLPGQVFMSGKVGFINIKLTGKFQVAKVNRVSFVPTGIQIEELQLSSEA
CCCCCCCEEEEEECCEEEECCCEEEEEEEEECEEEEEEECEEEEECCCCEEEHHHCCHHH
IAEVINDKEFSFDFRGLGLPVKVEEVLIKSGEVEINGGKSVRKAVSSWKD
HHHHHCCCCCCEEECCCCCCEEHHHHHHHCCCEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MRRRGYFLETLIFLLVLLVVTQVFLPGLAEKKIKEAFKQRVDGVESLRVNLGAFPALKLV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHH
IKRADWVEVRGTNLIVNNLPVTSFKSYIEDVRVTDGEIRGSNTDLNIKITEEDINKFIQK
HHCCCEEEECCCEEEEECCCHHHHHHHHHHHCCCCCEEECCCCEEEEEEEHHHHHHHHHH
NYPSLNNFTIKLLPGQVFMSGKVGFINIKLTGKFQVAKVNRVSFVPTGIQIEELQLSSEA
CCCCCCCEEEEEECCEEEECCCEEEEEEEEECEEEEEEECEEEEECCCCEEEHHHCCHHH
IAEVINDKEFSFDFRGLGLPVKVEEVLIKSGEVEINGGKSVRKAVSSWKD
HHHHHCCCCCCEEECCCCCCEEHHHHHHHCCCEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA