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The map label for this gene is yjiM [C]

Identifier: 220932445

GI number: 220932445

Start: 1724284

End: 1725351

Strand: Reverse

Name: yjiM [C]

Synonym: Hore_16090

Alternate gene names: 220932445

Gene position: 1725351-1724284 (Counterclockwise)

Preceding gene: 220932446

Following gene: 220932444

Centisome position: 66.92

GC content: 41.67

Gene sequence:

>1068_bases
ATGAAACCAATTACTGAAAGTTTATTTGAAAACAATAACAATGCGGGGGGAAAAATTTATACAAACTGCAGTTATGCCCC
TCCTGAGGTATTTGCGGCAGCGGGATACAGCTTGATAAGAAGCTGGCCCGGGGATGTAAGCCAAAATTTCCCGGACCTTC
TGCCGACTGATTTTTGTCCATATAGTAAAGCCTTTCTGGCAGACAATTTATCTGAAGAGAGTTTTAAAATAGTGACCACC
AGCTGTGATGCTATGAGGAGAATTAAGGATATACTTGGTCCTGAGGCCTTACTCCTGGAAGTGCCCAGGGTAAAGAAAAA
TTCCCGGGTAGATTTCTACTACAAACAACTTAGAAAGATTATTGAAAAGCTGGGGATAGACCCTGAAAGTAATATTTACC
GGTCAAACCTGGTAACAGAAATAAAAAAATATAATTACTGGAGGCAACAATTACAGGCTTTAATGAAAGAAATTATAAAC
TCTCCACACTATTCCATTATGGCCCTGGTTAAAGCGGTCTTTAAATATACCAGTCAGGACTTTAAAGGACTTAAGAGTTT
TATAGGTTCCAGTGGGATGAAACCCCTGGGTAAGTCCGGAACAGGAGGCATTGAAAAAAAAGATGAACTTAACCCCCGAC
TTTTGATAATCAGTACCTGTTTGCTGGATGGTAGTATAGCCAGTCTTGTTGAGGAGATAGGCTTTAAAGTGGTTGGTCTT
GATTCCTGCCTTGGTGAGCGCTCTTTTAATGTACATGTTTCTGAAAAGGGTGACCCCCTTAAATCCCTGGCCAGGTCATA
TCTTTATAAACCTACCTGTCCCCGAACCATGGATATGACAGCCAGATTAGAGGAGGTAAAAAAACTGGTTGAAGACAGGG
AACCGGATGGTTTGATATATTTTGTCCCCAAGTTCTGTGATCAGGCCAGTTATGATTTCAGGCTAATCAAAGACTGTGCT
AATGATTACGGAATCAGGGTGTTATTTCTGGATGGGGAATATGGAAGCGGCGAGAGTGGCCAGGTAAGAACCAGGGTTGC
TGCGTTCAGGGAATCATTTATACTATGA

Upstream 100 bases:

>100_bases
TCGATGACGATATTTAAATAATTATTTTTTTATATAGTTTGAGATAAAAAGAGTAATTTACTGGATTAAAAGAGTAGGGA
AATAGAAAAAAGGTGATAGT

Downstream 100 bases:

>100_bases
GATTAAAAAAGTTATATAAAATAATATTATTAAATTTGTTTTAATAATTCCACCACAAACTTTAAAAAGATAGGGAGGAT
TATAGAGAATAATGGGAAGT

Product: 2-hydroxyglutaryl-CoA dehydratase D-component

Products: NA

Alternate protein names: 2-Hydroxyglutaryl-CoA Dehydratase Subunit D; 2-Hydroxyglutaryl-CoA Dehydratase Subunit Beta; 2-Hydroxyglutaryl-CoA Dehydratase Subunit D-Like Protein; R-2-Hydroxyglutaryl-CoA Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit Beta-Like Protein; 2-Hydroxyglutaryl-Coa Dehydratase Subunit; (R)-2-Hydroxyglutaryl-CoA Dehydratase Beta-Subunit; (R)-2-Hydroxyglutaryl-CoA Dehydratase Beta Subunit; 2-Hydroxyglutaryl-CoA Dehydratase D-Component Subfamily; 2-Hydroxyglutaryl-CoA Dehydratase; (R)-2-Hydroxyglutaryl-CoA Dehydratase Subunit Beta; Dehydratase Family Protein; CoA-Substrate-Specific Activase

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKPITESLFENNNNAGGKIYTNCSYAPPEVFAAAGYSLIRSWPGDVSQNFPDLLPTDFCPYSKAFLADNLSEESFKIVTT
SCDAMRRIKDILGPEALLLEVPRVKKNSRVDFYYKQLRKIIEKLGIDPESNIYRSNLVTEIKKYNYWRQQLQALMKEIIN
SPHYSIMALVKAVFKYTSQDFKGLKSFIGSSGMKPLGKSGTGGIEKKDELNPRLLIISTCLLDGSIASLVEEIGFKVVGL
DSCLGERSFNVHVSEKGDPLKSLARSYLYKPTCPRTMDMTARLEEVKKLVEDREPDGLIYFVPKFCDQASYDFRLIKDCA
NDYGIRVLFLDGEYGSGESGQVRTRVAAFRESFIL

Sequences:

>Translated_355_residues
MKPITESLFENNNNAGGKIYTNCSYAPPEVFAAAGYSLIRSWPGDVSQNFPDLLPTDFCPYSKAFLADNLSEESFKIVTT
SCDAMRRIKDILGPEALLLEVPRVKKNSRVDFYYKQLRKIIEKLGIDPESNIYRSNLVTEIKKYNYWRQQLQALMKEIIN
SPHYSIMALVKAVFKYTSQDFKGLKSFIGSSGMKPLGKSGTGGIEKKDELNPRLLIISTCLLDGSIASLVEEIGFKVVGL
DSCLGERSFNVHVSEKGDPLKSLARSYLYKPTCPRTMDMTARLEEVKKLVEDREPDGLIYFVPKFCDQASYDFRLIKDCA
NDYGIRVLFLDGEYGSGESGQVRTRVAAFRESFIL
>Mature_355_residues
MKPITESLFENNNNAGGKIYTNCSYAPPEVFAAAGYSLIRSWPGDVSQNFPDLLPTDFCPYSKAFLADNLSEESFKIVTT
SCDAMRRIKDILGPEALLLEVPRVKKNSRVDFYYKQLRKIIEKLGIDPESNIYRSNLVTEIKKYNYWRQQLQALMKEIIN
SPHYSIMALVKAVFKYTSQDFKGLKSFIGSSGMKPLGKSGTGGIEKKDELNPRLLIISTCLLDGSIASLVEEIGFKVVGL
DSCLGERSFNVHVSEKGDPLKSLARSYLYKPTCPRTMDMTARLEEVKKLVEDREPDGLIYFVPKFCDQASYDFRLIKDCA
NDYGIRVLFLDGEYGSGESGQVRTRVAAFRESFIL

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082427, Length=353, Percent_Identity=22.6628895184136, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40022; Mature: 40022

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPITESLFENNNNAGGKIYTNCSYAPPEVFAAAGYSLIRSWPGDVSQNFPDLLPTDFCP
CCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCC
YSKAFLADNLSEESFKIVTTSCDAMRRIKDILGPEALLLEVPRVKKNSRVDFYYKQLRKI
CHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
IEKLGIDPESNIYRSNLVTEIKKYNYWRQQLQALMKEIINSPHYSIMALVKAVFKYTSQD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FKGLKSFIGSSGMKPLGKSGTGGIEKKDELNPRLLIISTCLLDGSIASLVEEIGFKVVGL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHCCEEEEH
DSCLGERSFNVHVSEKGDPLKSLARSYLYKPTCPRTMDMTARLEEVKKLVEDREPDGLIY
HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
FVPKFCDQASYDFRLIKDCANDYGIRVLFLDGEYGSGESGQVRTRVAAFRESFIL
ECCHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPITESLFENNNNAGGKIYTNCSYAPPEVFAAAGYSLIRSWPGDVSQNFPDLLPTDFCP
CCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCC
YSKAFLADNLSEESFKIVTTSCDAMRRIKDILGPEALLLEVPRVKKNSRVDFYYKQLRKI
CHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
IEKLGIDPESNIYRSNLVTEIKKYNYWRQQLQALMKEIINSPHYSIMALVKAVFKYTSQD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FKGLKSFIGSSGMKPLGKSGTGGIEKKDELNPRLLIISTCLLDGSIASLVEEIGFKVVGL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHCCEEEEH
DSCLGERSFNVHVSEKGDPLKSLARSYLYKPTCPRTMDMTARLEEVKKLVEDREPDGLIY
HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
FVPKFCDQASYDFRLIKDCANDYGIRVLFLDGEYGSGESGQVRTRVAAFRESFIL
ECCHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA