Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932371

Identifier: 220932371

GI number: 220932371

Start: 1641967

End: 1643763

Strand: Reverse

Name: 220932371

Synonym: Hore_15350

Alternate gene names: NA

Gene position: 1643763-1641967 (Counterclockwise)

Preceding gene: 220932372

Following gene: 220932370

Centisome position: 63.76

GC content: 43.35

Gene sequence:

>1797_bases
GTGTTATATAAAATTATAGTCCGTCAAAACAATAAGGAGAGGGTATTGACCGGAAAACAGGGAGATAATCTACTAAAAAT
ATTACAAAAAAATCATTATAAAACAAAGGCCCCCTGTGGCGGAGTCGGTACCTGTGGTAAGTGTAAAGTAAAGGTAAATT
ATGGAGGAAGTCAGCCAACCCCCGGCGAAAGAGAGCTCCTGGATGAATCTGAGATTAAAGCAGGTATCAGGCTTGCGTGT
CAGACAAGGATTAGCGGTCATATGGAGGTAGAGCTTGATACAGATGAAGAAATAGAGGGTCTGGTTGAAGGGATCAGGGT
TGCTGTCGAACAGGACCCTTTTATACAAAAGGATATGGTCAGGCTTGAGGGACCATCTCTTGATGATCAGCGGGATTTAC
TGACCCGGGTTTCAGGGGCTATTTCTTCTGATGGGATAAGCCTTAAAGCCCTGGATTACCTGGCTTCAATAGATATTGAC
CGTGAATTATCTGTTATCAGGGCCGGTAACAGGGTTATTGATATAAATCAGGATAATGGTAAAGGTATTTATGGTATAGC
GGTCGATATCGGAACCACCACCATTGCCATGTATCTAATAGACCTGATTACCGGAAAAGAGTCAGGGGTCCATTCCTTTA
GCAATCCCCAGAAAAAATTCGGGGCTGATGTTATCTCCCGTATTAATTATACTTTACATAATGATAATGGTATCAAAGAC
CTGCAACAGGAGTTGGTTGACGGGCTGAACAGGGGGATAAAGCATCTCACAGATGCTGTTAACCTCAAAAGGGACGAAAT
ATATCATTTAACCATTGCCGGTAATACGACAATGCTTCACAGTTTACTGGGGGTTGATGCTTCTTCAATCGCCCGGGCCC
CCTATATCCCGGTCTTTACTGACAGCCTTATGTTCAGAGCAGGCAAACTGGGTTTTAATATTAATGAAAACGGGGTTGTT
CAACTCCTGCCGTCTATATCTGGCTATGTCGGGGGAGATATTGTCGGGGATTTACTGGTAACTGACTTTGAATCTCCTGA
GTGGAATTTATTAATTGACATTGGAACCAATGGGGAGATAGTCCTGGGGAACAGGGATAAGCTTTTTGCCTGTTCAGCAG
CGGCTGGTCCTGCCTTTGAAGGGGCCAGGATAACATTTGGTATGGCCGGGATTACCGGGGCTATATCTAAATACCGTTTT
AATAATGGAGAGGTCCATTACCGGACAATAAATAATAACAGGGCCAGGGGTATCTGTGGTTCCGGGCTTGTTGATATCAT
AGCCGAACTTTTAAAATATGGATTTTTAAAGGAGACAGGGGCTTTCAAGGATGGTGTTGAACTGAAGGCCGGTTATGCTG
ATTATTTAACCACCTATAAGGGAATAACTTCATTTAGAGTTGTTCCCGGGAATGAAACCCATGATAATAAGGATATATTA
TTAACCCAGAAGGATATCAGGGAGTTTCAGCTGGCTAAAGGTGCTATTCTGGCCGGGATAAAAATCCTCTTAAAGGAAGC
CGGTGTTGACTACAGTGATATTGAAAAAGTTTATCTGGCCGGTGGTTTTGGAAATTATATTGACCCTCATAACGCTTCCC
TTATCGGGCTTATTCCGGAGAATCTTGAGGATAAGGTAATCAGAATTGGAAATGGGGCCGGCATGGGGGCCAGGGCGGTT
TTACTCGACCAGAAGCTGATTGAATATGCCGCCCGGCTCAAGGAAAAGACTACCTATATTGAGCTATCCAGTCATTCTGG
TTTTCAGGAGGAATTTATGAATTCTATGGGTTTTTAA

Upstream 100 bases:

>100_bases
AGGCATTTGAGGAGTCGGGCTTATCGGTCTGGCTCCTTTTTTAATATATTCCTTTAAATTACGGCAGAAGGTTAATTTGT
TCTAGAGGGGGAGTGGCCAA

Downstream 100 bases:

>100_bases
ACAAAAAAGGGTTTTCAAGTTGGTCTGGGAACTGTCCGGCCTTTTACAGATTGTTTTGATTTTTTGAAGGGGTGAAATCA
TGACAGACAGGGCTGATAAT

Product: ferredoxin

Products: NA

Alternate protein names: Electron Transfer Protein; Corrinoid Activation/Regeneration Protein; Flavoprotein; Vitamin; Ferredoxin Domain-Containing Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Methyltransferase Activation Protein MapA; Activating; Methylamine Methyltransferase Corrinoid Activation Protein

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPTPGERELLDESEIKAGIRLAC
QTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMVRLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDID
RELSVIRAGNRVIDINQDNGKGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD
LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFTDSLMFRAGKLGFNINENGVV
QLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEIVLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRF
NNGEVHYRTINNNRARGICGSGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL
LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPENLEDKVIRIGNGAGMGARAV
LLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF

Sequences:

>Translated_598_residues
MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPTPGERELLDESEIKAGIRLAC
QTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMVRLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDID
RELSVIRAGNRVIDINQDNGKGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD
LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFTDSLMFRAGKLGFNINENGVV
QLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEIVLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRF
NNGEVHYRTINNNRARGICGSGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL
LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPENLEDKVIRIGNGAGMGARAV
LLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF
>Mature_598_residues
MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPTPGERELLDESEIKAGIRLAC
QTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMVRLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDID
RELSVIRAGNRVIDINQDNGKGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD
LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFTDSLMFRAGKLGFNINENGVV
QLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEIVLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRF
NNGEVHYRTINNNRARGICGSGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL
LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPENLEDKVIRIGNGAGMGARAV
LLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF

Specific function: Unknown

COG id: COG3894

COG function: function code R; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65202; Mature: 65202

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPT
CEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PGERELLDESEIKAGIRLACQTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMV
CCHHHHCCHHHHHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHEEECCCCCHHHHHH
RLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDIDRELSVIRAGNRVIDINQDNG
EECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCEEECCCEEEEEECCCC
KGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD
CEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHH
LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFT
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHCCCCCCCEEH
DSLMFRAGKLGFNINENGVVQLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEI
HHHHHHHCCCCCCCCCCCCEEEECHHCCCCCCHHHHHHHEECCCCCCEEEEEEECCCCEE
VLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRFNNGEVHYRTINNNRARGICG
EECCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCC
SGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL
CCHHHHHHHHHHHCCHHHCCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCCCCCCEEE
LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPE
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCEEEEECCC
NLEDKVIRIGNGAGMGARAVLLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLYKIIVRQNNKERVLTGKQGDNLLKILQKNHYKTKAPCGGVGTCGKCKVKVNYGGSQPT
CEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PGERELLDESEIKAGIRLACQTRISGHMEVELDTDEEIEGLVEGIRVAVEQDPFIQKDMV
CCHHHHCCHHHHHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHEEECCCCCHHHHHH
RLEGPSLDDQRDLLTRVSGAISSDGISLKALDYLASIDIDRELSVIRAGNRVIDINQDNG
EECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCEEECCCEEEEEECCCC
KGIYGIAVDIGTTTIAMYLIDLITGKESGVHSFSNPQKKFGADVISRINYTLHNDNGIKD
CEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHH
LQQELVDGLNRGIKHLTDAVNLKRDEIYHLTIAGNTTMLHSLLGVDASSIARAPYIPVFT
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHCCCCCCCEEH
DSLMFRAGKLGFNINENGVVQLLPSISGYVGGDIVGDLLVTDFESPEWNLLIDIGTNGEI
HHHHHHHCCCCCCCCCCCCEEEECHHCCCCCCHHHHHHHEECCCCCCEEEEEEECCCCEE
VLGNRDKLFACSAAAGPAFEGARITFGMAGITGAISKYRFNNGEVHYRTINNNRARGICG
EECCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCC
SGLVDIIAELLKYGFLKETGAFKDGVELKAGYADYLTTYKGITSFRVVPGNETHDNKDIL
CCHHHHHHHHHHHCCHHHCCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCCCCCCEEE
LTQKDIREFQLAKGAILAGIKILLKEAGVDYSDIEKVYLAGGFGNYIDPHNASLIGLIPE
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCEEEEECCC
NLEDKVIRIGNGAGMGARAVLLDQKLIEYAARLKEKTTYIELSSHSGFQEEFMNSMGF
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA