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The map label for this gene is yrrO [H]

Identifier: 220932315

GI number: 220932315

Start: 1573374

End: 1575377

Strand: Reverse

Name: yrrO [H]

Synonym: Hore_14790

Alternate gene names: 220932315

Gene position: 1575377-1573374 (Counterclockwise)

Preceding gene: 220932316

Following gene: 220932314

Centisome position: 61.11

GC content: 45.16

Gene sequence:

>2004_bases
ATGATGATAAATAACGTGGAACTACTGGCTCCTGCCGGTAAGTGGGAGGCCCTGGAAACGGTAATTGAAGCCGGGGCAGA
TGCTGTTTACCTGGGTGGTAAAAAGCATAATATGAGGCTTCTCAGGACCGGTTTCAACTTCAGTAATGAAGAATTAAAAG
AGGCTGTTAACCTGGCCCACAGCCGGGGAGTAAAGATATATGTAACTGTTAATAATTTACAGGGCGATGAGGAACTTGAT
GAGATAGCACCATATCTTCAGTATCTGGCTGAAATTGAGGTTGATGCTTTTATAGTTCAGGACCTGGGATTACTCTATCT
TATTAATGAGCTGGGGCTTGAGGTTCCTGTACACTCCAGTGTAATGATGAATGTTCATAACATAGATATGGCCCGGTATT
TACATGACCATGGAGTCAGAAGGTTTATAGTTAGCCGGGAATTATCCTTTGACCAGGTGAGGCATATGACCCGGGAAACC
GGCTTTGAATATGAATATTTTATACATGGAGATATGTGTTTTTCTCAGAGTGGGCAGTGTTTATTGAGTGGTATGGTTTT
TGGGAACAGCAGCAACAGGGGGCGTTGTCTAAAGCCCTGTCGCTGGCCCTATAGCCTGGCCCGGTATAAAAACGGTTATT
TTGAAGAGGGGGTAGAGGTTAAGGCTGACGGTCCTTACTTCCTGGCGGTAAAGGATATGTGTGTTTTCCGGCATATACCC
CAGTTGATCAGGTCGGGAATTGTCTCCTTTAAGATAGAGGGCAGAATGAAGCCGGCCAGTCAGCTTAAGAGAATTGTATC
TGCTTACCGGACAGCTATCGACAGGTACCTTGATGATCCGGTGGGTTATACGGTTGATGAGGATATTTACCGTGACCTCT
ATGATCACCGGGTCCGGGATTTCAGTACCTGTTTTGCCCTTAAGAATCCGGGGTCAGATGGAATCGGTTATACCGGGGAG
AGGGAACCCAAGTTTTTTAGTGAAGCCCGGGAGGAGAAAAAATTAAATCCTGACATGGATCTTGATATGGATCTTAAACT
GGATATAGATAACCCCACGGATTATAGTTCAGGGGCAAAGGAGGTTGTGGCCCTTCCTTTGCTATCGATTAAGGTTAACG
GTCTTGAGGAGGCTGAAGCTGCTTTAAAGTCAGGGGTAGACCGCATCTATATAGGTGGTGAAACTCCGTCCTGGAAACCT
CCCTGTGGCCAGGAGGTTATAAACAAGGTCCTTGATAAAGCCGAAAAAGCAGGGGTGGAAGTGGTAGTAACTACCCCCAG
AATTACTTTCTCTGATGAAATGGAAGAATATATTGAGTTGTTGAAGGGATTAGATCTGGAGCAAACCGGTGGAGTTATGG
CCGGTAACCTGGGGATGATCAGAGCCCTGAATGAGTATTTTGATACCAGGGTTATGGCAGATTTTGGAGTTAATGCGTTT
AACACCAGGGCTCTCAGTATTTTAAAAGAATCCGGGGTGGTTCAGGTTACAAATCAACTGGAATCTTCCCTGAAGCAGAT
TTTAAAGATGGCTTCAGGTACAGATATGGACCTCGAGCTTATCGGTCATGGCCATCTTCCCTTTATGGTATCTGACCACT
GTCTCCTTTCTGAACTTCTGGAAGGGAAGACTCCGGAGGATCAGTGTTCTGCCCCCTGTCGGGGTGAGAGATATGGACTT
GTCAATGATAAAAAGAGGGTTTACCCTGTTATGACCGATCAGTATTGCCGGACCCATCTTTATCTCAGTAAAGAGCTTGC
TCTCCTCCCATTTCTGGATAGAATATTATTATCAGGTATAAAGAGTTTCAGGATTGAGGCCGGACTTTATAATGCTGCAA
AGGTAGAGGCTGTAGTTGATATCTATAAACGGGCCTTTATAGCTATTAAAAATGGTCGCTGGTCACAGGAAAAAACATCG
TTATATAATGAGCTTAAGGGGTTAAGTGATACCGGTTATACCCTGGCAGCCTACGAGAAAGGGGTCCTGGGGACCGGTAC
TTAA

Upstream 100 bases:

>100_bases
CGGAGTATATCGGAGCTTATAGATTTTGTAGTGGGAAGAGTACTGGACCACCTTCAACTGGAGCATAGCCTTTACCAACG
CTGGAAAGGAGTGCATGATA

Downstream 100 bases:

>100_bases
TCCACAAAACTGTTATGATAGTTTGTTTTAAAAAATTTGCTTAAAAATTAAAAGGAGGGGTAATGTGGGTGAGAAAAATT
ATATTGGTCCCGATGCCATA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MMINNVELLAPAGKWEALETVIEAGADAVYLGGKKHNMRLLRTGFNFSNEELKEAVNLAHSRGVKIYVTVNNLQGDEELD
EIAPYLQYLAEIEVDAFIVQDLGLLYLINELGLEVPVHSSVMMNVHNIDMARYLHDHGVRRFIVSRELSFDQVRHMTRET
GFEYEYFIHGDMCFSQSGQCLLSGMVFGNSSNRGRCLKPCRWPYSLARYKNGYFEEGVEVKADGPYFLAVKDMCVFRHIP
QLIRSGIVSFKIEGRMKPASQLKRIVSAYRTAIDRYLDDPVGYTVDEDIYRDLYDHRVRDFSTCFALKNPGSDGIGYTGE
REPKFFSEAREEKKLNPDMDLDMDLKLDIDNPTDYSSGAKEVVALPLLSIKVNGLEEAEAALKSGVDRIYIGGETPSWKP
PCGQEVINKVLDKAEKAGVEVVVTTPRITFSDEMEEYIELLKGLDLEQTGGVMAGNLGMIRALNEYFDTRVMADFGVNAF
NTRALSILKESGVVQVTNQLESSLKQILKMASGTDMDLELIGHGHLPFMVSDHCLLSELLEGKTPEDQCSAPCRGERYGL
VNDKKRVYPVMTDQYCRTHLYLSKELALLPFLDRILLSGIKSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWSQEKTS
LYNELKGLSDTGYTLAAYEKGVLGTGT

Sequences:

>Translated_667_residues
MMINNVELLAPAGKWEALETVIEAGADAVYLGGKKHNMRLLRTGFNFSNEELKEAVNLAHSRGVKIYVTVNNLQGDEELD
EIAPYLQYLAEIEVDAFIVQDLGLLYLINELGLEVPVHSSVMMNVHNIDMARYLHDHGVRRFIVSRELSFDQVRHMTRET
GFEYEYFIHGDMCFSQSGQCLLSGMVFGNSSNRGRCLKPCRWPYSLARYKNGYFEEGVEVKADGPYFLAVKDMCVFRHIP
QLIRSGIVSFKIEGRMKPASQLKRIVSAYRTAIDRYLDDPVGYTVDEDIYRDLYDHRVRDFSTCFALKNPGSDGIGYTGE
REPKFFSEAREEKKLNPDMDLDMDLKLDIDNPTDYSSGAKEVVALPLLSIKVNGLEEAEAALKSGVDRIYIGGETPSWKP
PCGQEVINKVLDKAEKAGVEVVVTTPRITFSDEMEEYIELLKGLDLEQTGGVMAGNLGMIRALNEYFDTRVMADFGVNAF
NTRALSILKESGVVQVTNQLESSLKQILKMASGTDMDLELIGHGHLPFMVSDHCLLSELLEGKTPEDQCSAPCRGERYGL
VNDKKRVYPVMTDQYCRTHLYLSKELALLPFLDRILLSGIKSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWSQEKTS
LYNELKGLSDTGYTLAAYEKGVLGTGT
>Mature_667_residues
MMINNVELLAPAGKWEALETVIEAGADAVYLGGKKHNMRLLRTGFNFSNEELKEAVNLAHSRGVKIYVTVNNLQGDEELD
EIAPYLQYLAEIEVDAFIVQDLGLLYLINELGLEVPVHSSVMMNVHNIDMARYLHDHGVRRFIVSRELSFDQVRHMTRET
GFEYEYFIHGDMCFSQSGQCLLSGMVFGNSSNRGRCLKPCRWPYSLARYKNGYFEEGVEVKADGPYFLAVKDMCVFRHIP
QLIRSGIVSFKIEGRMKPASQLKRIVSAYRTAIDRYLDDPVGYTVDEDIYRDLYDHRVRDFSTCFALKNPGSDGIGYTGE
REPKFFSEAREEKKLNPDMDLDMDLKLDIDNPTDYSSGAKEVVALPLLSIKVNGLEEAEAALKSGVDRIYIGGETPSWKP
PCGQEVINKVLDKAEKAGVEVVVTTPRITFSDEMEEYIELLKGLDLEQTGGVMAGNLGMIRALNEYFDTRVMADFGVNAF
NTRALSILKESGVVQVTNQLESSLKQILKMASGTDMDLELIGHGHLPFMVSDHCLLSELLEGKTPEDQCSAPCRGERYGL
VNDKKRVYPVMTDQYCRTHLYLSKELALLPFLDRILLSGIKSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWSQEKTS
LYNELKGLSDTGYTLAAYEKGVLGTGT

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=281, Percent_Identity=35.2313167259786, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1788397, Length=372, Percent_Identity=29.5698924731183, Blast_Score=143, Evalue=4e-35,
Organism=Escherichia coli, GI1789548, Length=303, Percent_Identity=29.042904290429, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 74944; Mature: 74944

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMINNVELLAPAGKWEALETVIEAGADAVYLGGKKHNMRLLRTGFNFSNEELKEAVNLAH
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHH
SRGVKIYVTVNNLQGDEELDEIAPYLQYLAEIEVDAFIVQDLGLLYLINELGLEVPVHSS
HCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VMMNVHNIDMARYLHDHGVRRFIVSRELSFDQVRHMTRETGFEYEYFIHGDMCFSQSGQC
HEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCEEECCCCCE
LLSGMVFGNSSNRGRCLKPCRWPYSLARYKNGYFEEGVEVKADGPYFLAVKDMCVFRHIP
EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHCCCEEECCCCEEEEHHHHHHHHHHH
QLIRSGIVSFKIEGRMKPASQLKRIVSAYRTAIDRYLDDPVGYTVDEDIYRDLYDHRVRD
HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FSTCFALKNPGSDGIGYTGEREPKFFSEAREEKKLNPDMDLDMDLKLDIDNPTDYSSGAK
HHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCH
EVVALPLLSIKVNGLEEAEAALKSGVDRIYIGGETPSWKPPCGQEVINKVLDKAEKAGVE
HHHHEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCE
VVVTTPRITFSDEMEEYIELLKGLDLEQTGGVMAGNLGMIRALNEYFDTRVMADFGVNAF
EEEECCCEEEHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHH
NTRALSILKESGVVQVTNQLESSLKQILKMASGTDMDLELIGHGHLPFMVSDHCLLSELL
HHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCHHHHHHHH
EGKTPEDQCSAPCRGERYGLVNDKKRVYPVMTDQYCRTHLYLSKELALLPFLDRILLSGI
CCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWSQEKTSLYNELKGLSDTGYTLAAYEK
HHHEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECC
GVLGTGT
CCCCCCC
>Mature Secondary Structure
MMINNVELLAPAGKWEALETVIEAGADAVYLGGKKHNMRLLRTGFNFSNEELKEAVNLAH
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHH
SRGVKIYVTVNNLQGDEELDEIAPYLQYLAEIEVDAFIVQDLGLLYLINELGLEVPVHSS
HCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VMMNVHNIDMARYLHDHGVRRFIVSRELSFDQVRHMTRETGFEYEYFIHGDMCFSQSGQC
HEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCEEECCCCCE
LLSGMVFGNSSNRGRCLKPCRWPYSLARYKNGYFEEGVEVKADGPYFLAVKDMCVFRHIP
EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHCCCEEECCCCEEEEHHHHHHHHHHH
QLIRSGIVSFKIEGRMKPASQLKRIVSAYRTAIDRYLDDPVGYTVDEDIYRDLYDHRVRD
HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FSTCFALKNPGSDGIGYTGEREPKFFSEAREEKKLNPDMDLDMDLKLDIDNPTDYSSGAK
HHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCH
EVVALPLLSIKVNGLEEAEAALKSGVDRIYIGGETPSWKPPCGQEVINKVLDKAEKAGVE
HHHHEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCE
VVVTTPRITFSDEMEEYIELLKGLDLEQTGGVMAGNLGMIRALNEYFDTRVMADFGVNAF
EEEECCCEEEHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHH
NTRALSILKESGVVQVTNQLESSLKQILKMASGTDMDLELIGHGHLPFMVSDHCLLSELL
HHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCHHHHHHHH
EGKTPEDQCSAPCRGERYGLVNDKKRVYPVMTDQYCRTHLYLSKELALLPFLDRILLSGI
CCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWSQEKTSLYNELKGLSDTGYTLAAYEK
HHHEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECC
GVLGTGT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]