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The map label for this gene is ubiX [C]

Identifier: 220932316

GI number: 220932316

Start: 1575364

End: 1575981

Strand: Reverse

Name: ubiX [C]

Synonym: Hore_14800

Alternate gene names: 220932316

Gene position: 1575981-1575364 (Counterclockwise)

Preceding gene: 220932317

Following gene: 220932315

Centisome position: 61.13

GC content: 47.25

Gene sequence:

>618_bases
TTGTTGAAGATAGTTACTGCCATAACAGGAGCCAGTGGGGTTATTTACGGGAAACGGTTTGTTGAAGAGGTAAACCGCCT
CGGACATAAACAGACCCTTTTGATAACAGAGGCGGGAGAGAAGGTACTGTCACAGGAACTGGATTTATCCATTAAAAAGG
ATAACCCCCTTGCTTCAATACAGGCCGAATGGGATCTTTCAAGGCCTGATTTGATTTCCCGGGAAAAGATAGATGATATT
ACGGCCAAAATTGCCAGTGGAAGCAGGGCTCCGGATGCTGTGGTGGTTATCCCCTGTACCATGGGAACCCTGGCCCGGGT
TGCCCATGGGTTTTCCTCGAATCTCCTGGAAAGGGTCTGTGATGTGGCCCTTAAAGAAAACAAGAAATTGATCCTGGTTC
CCCGGGAAACCCCCTTAAACCAGATTCACCTGGAGAATATGCTGGCTTTAAAAAAAATGGGGGCTGATGTGGTACCGGCC
ATGCCCGCCTTTTATAACCATCCCCGGAGTATATCGGAGCTTATAGATTTTGTAGTGGGAAGAGTACTGGACCACCTTCA
ACTGGAGCATAGCCTTTACCAACGCTGGAAAGGAGTGCATGATAATGATGATAAATAA

Upstream 100 bases:

>100_bases
ACCTACATGAAAAAATAAAACATTACATTAGTGATCAATAAAACACTCAATTTACTGAATTCGAACCTTCAGCATTTACT
GAAAAGGAGTTGATAGACAA

Downstream 100 bases:

>100_bases
CGTGGAACTACTGGCTCCTGCCGGTAAGTGGGAGGCCCTGGAAACGGTAATTGAAGCCGGGGCAGATGCTGTTTACCTGG
GTGGTAAAAAGCATAATATG

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLKIVTAITGASGVIYGKRFVEEVNRLGHKQTLLITEAGEKVLSQELDLSIKKDNPLASIQAEWDLSRPDLISREKIDDI
TAKIASGSRAPDAVVVIPCTMGTLARVAHGFSSNLLERVCDVALKENKKLILVPRETPLNQIHLENMLALKKMGADVVPA
MPAFYNHPRSISELIDFVVGRVLDHLQLEHSLYQRWKGVHDNDDK

Sequences:

>Translated_205_residues
MLKIVTAITGASGVIYGKRFVEEVNRLGHKQTLLITEAGEKVLSQELDLSIKKDNPLASIQAEWDLSRPDLISREKIDDI
TAKIASGSRAPDAVVVIPCTMGTLARVAHGFSSNLLERVCDVALKENKKLILVPRETPLNQIHLENMLALKKMGADVVPA
MPAFYNHPRSISELIDFVVGRVLDHLQLEHSLYQRWKGVHDNDDK
>Mature_205_residues
MLKIVTAITGASGVIYGKRFVEEVNRLGHKQTLLITEAGEKVLSQELDLSIKKDNPLASIQAEWDLSRPDLISREKIDDI
TAKIASGSRAPDAVVVIPCTMGTLARVAHGFSSNLLERVCDVALKENKKLILVPRETPLNQIHLENMLALKKMGADVVPA
MPAFYNHPRSISELIDFVVGRVLDHLQLEHSLYQRWKGVHDNDDK

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=201, Percent_Identity=35.3233830845771, Blast_Score=130, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6320746, Length=197, Percent_Identity=38.0710659898477, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22794; Mature: 22794

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIVTAITGASGVIYGKRFVEEVNRLGHKQTLLITEAGEKVLSQELDLSIKKDNPLASI
CEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCEEECCCCCEEE
QAEWDLSRPDLISREKIDDITAKIASGSRAPDAVVVIPCTMGTLARVAHGFSSNLLERVC
EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHH
DVALKENKKLILVPRETPLNQIHLENMLALKKMGADVVPAMPAFYNHPRSISELIDFVVG
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHH
RVLDHLQLEHSLYQRWKGVHDNDDK
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKIVTAITGASGVIYGKRFVEEVNRLGHKQTLLITEAGEKVLSQELDLSIKKDNPLASI
CEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCEEECCCCCEEE
QAEWDLSRPDLISREKIDDITAKIASGSRAPDAVVVIPCTMGTLARVAHGFSSNLLERVC
EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHH
DVALKENKKLILVPRETPLNQIHLENMLALKKMGADVVPAMPAFYNHPRSISELIDFVVG
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHH
RVLDHLQLEHSLYQRWKGVHDNDDK
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]