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The map label for this gene is trg [C]

Identifier: 220932288

GI number: 220932288

Start: 1542137

End: 1544182

Strand: Reverse

Name: trg [C]

Synonym: Hore_14520

Alternate gene names: 220932288

Gene position: 1544182-1542137 (Counterclockwise)

Preceding gene: 220932289

Following gene: 220932287

Centisome position: 59.9

GC content: 37.83

Gene sequence:

>2046_bases
ATGACAAACAACCGGATTTTTTACTTATTAAAAGCAATTTTCGGAAGATTAGAATCTTTCTTTATTAAGATTTTAACAAG
GATTAATATTGGAAAACGCCTGATGGTTTTCAGTTTAATTTTGATTATTTCTATAGTTGCTTTAAGTTCCTGGCAGTCTA
TAAATACTTTTTCAAATTATGTAAGTAGCAAGCAGAAAGAGAAGCTAATAGAGAATTATAATGTGGTTCACAGTATGCTG
GAAGAGACGAAAAGTAAATATACCGGTTATAGTAAGACTATTGCCAGGCTGGAGGAGGTTAAAAAACTTCTCAGGGGATC
AGGTAATGATGATATTCTTTCTGAGTTAAAACAGGAACTACAGGTTGGTGGTATTGAGTTAAGGGATCAGGACTTTAAAG
TAGTGTCAGCGACGGGAGTTACAGGATTACGGGATAAAAGTAAAACGGCAAATATGCTCTCTATGCTGGTTAAACAGGGA
ATAGCTATACCATTTCTGACCCGTAATGGTTCTAATATACAGCTGAATGCTATCTGTGGAGTAAAGGATGGTAATAAGTA
TCTCGGAGCAGTTATTGTTAGCCAGTATATTAACATTAAGTTGTTGAATAACCTGGCCAAAAATACAGGAACTTCTGTGC
AGTTATACAGTAACAAAAAACTTGTATTGGGAAATGTATCCTCAGAAAGTCTTAAAAATATAAACCTCATTACTGAAGAT
GTGAGAAAACAATTTAACAACAAAGCTTCCCTTAATTACCTGATCGATAAGAAGACAATAGGGGGCGAGTCATATCTAAT
AAATTATATCCCTCTTAAAGATTATTTCAGTCAACCAATCGGTTATTTTGTGTTGATGGCCTCCCAGGGTCATGTGAATG
TTACAAAACATAACTTATTAATTAAAACACTTATGTCTGCTGCACTGTTTACTATTATATCATTTATAATAATCAGTCTT
ATATCAAGGAGTATCACAGTACCTCTTAATAAAATTACTAAAGCAACAAAAAAGGTAGCTGCCGGGGATTTAACCCAGAC
TGTTACCACTGGAACTGGAGATCAGCTGGCGGTATTAACAGATAATTTTAATAAGATGATTACAAATCTGCGAAAGATGG
TAGAAAGCCTGGTCGAGTCCTCCCGGGATATCCTCAGGATGTCAACAGGTCTTTCCAAAAATTCGAGTAAAGCCAGTGAG
GCTTCTCAGGAAGTGGCTGCGGCCAGTGGGGAAATAGCAAATGGGACCGAAGCCCAGGCCCGACAGATCAGTAAAACTAC
TGAACTTTTAAGTGATATCAATAAACAGGCTAAAAATGTAAGCCAGGGTTCTACGAGGATTATAGATTCGATAGAGGGGG
CCTATAACAAGTCCCATACGAGTCTGGAGGTTATGGACAGGGTATCCCGAAATATGCAGGTTGTAATGGAAGAAGTTAAG
AAAACCAATTCAAGGGTGGCTTCCCTGGAAGGGAAGGTTAAGAAGATAAATAACATAATTGAAGCTATCAACTACCTCAA
TGAAGAAACAACCCTGCTATCCTTAAATGCCTCTATTGAAGCAGCCAGGGCCGGTGAGGCCGGTCGAGGGTTTGCCGTAG
TGGCTGAGGAAATAAAAAGACTGGCTGATGAATCAAATAAATTTCTTGAAGAAGTTAATAATATCTTTGGTGAAATCAAT
GAAGCCATGAAGAGTGTTGTTGAATCAATGGATAAAAGTAGTCAGCTTATTAATAATAGTGAAGAAGATGTTACCGGTGC
AAAACATGTTCTGGATGAGATCCAGCAGGTAATAACCAATGCCAAACACGTGTCTGAGGAGATACACACCTATATTGAAG
AACAGCTAGAGGGTACCAGGAATGTAGCCAGTGCTATCGATGAAATTAATGGAATAGCTCAAAATAATGCCAGCCAGACC
AGAAAGGCTGTTGAATTGAATAAGGAACACAGCCGATTTGTTAAACATATTTCGGAGGCAGCTGATGACCTCTCGGTTAT
GGCTAATCAACTGGAGATGCTGGTAAGTAAATTTATATTGAAATAA

Upstream 100 bases:

>100_bases
TATAAGTTAATACAGGTAAAAACCAGGGGATGGTCTGTCTGTTCAAAGAGAGTAGTCCGGTCTTAATAATTAAAATTTAA
GGGGAGTAGGAGAGGTAGTG

Downstream 100 bases:

>100_bases
AATGTTGTTAACACTATCAAAATATATTTAATTGAATTTTTTAGTAAAATTATGTATAATATTCTGGGTGGTATCTATGG
ATAAAATAACAATGAAAGAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 681; Mature: 680

Protein sequence:

>681_residues
MTNNRIFYLLKAIFGRLESFFIKILTRINIGKRLMVFSLILIISIVALSSWQSINTFSNYVSSKQKEKLIENYNVVHSML
EETKSKYTGYSKTIARLEEVKKLLRGSGNDDILSELKQELQVGGIELRDQDFKVVSATGVTGLRDKSKTANMLSMLVKQG
IAIPFLTRNGSNIQLNAICGVKDGNKYLGAVIVSQYINIKLLNNLAKNTGTSVQLYSNKKLVLGNVSSESLKNINLITED
VRKQFNNKASLNYLIDKKTIGGESYLINYIPLKDYFSQPIGYFVLMASQGHVNVTKHNLLIKTLMSAALFTIISFIIISL
ISRSITVPLNKITKATKKVAAGDLTQTVTTGTGDQLAVLTDNFNKMITNLRKMVESLVESSRDILRMSTGLSKNSSKASE
ASQEVAAASGEIANGTEAQARQISKTTELLSDINKQAKNVSQGSTRIIDSIEGAYNKSHTSLEVMDRVSRNMQVVMEEVK
KTNSRVASLEGKVKKINNIIEAINYLNEETTLLSLNASIEAARAGEAGRGFAVVAEEIKRLADESNKFLEEVNNIFGEIN
EAMKSVVESMDKSSQLINNSEEDVTGAKHVLDEIQQVITNAKHVSEEIHTYIEEQLEGTRNVASAIDEINGIAQNNASQT
RKAVELNKEHSRFVKHISEAADDLSVMANQLEMLVSKFILK

Sequences:

>Translated_681_residues
MTNNRIFYLLKAIFGRLESFFIKILTRINIGKRLMVFSLILIISIVALSSWQSINTFSNYVSSKQKEKLIENYNVVHSML
EETKSKYTGYSKTIARLEEVKKLLRGSGNDDILSELKQELQVGGIELRDQDFKVVSATGVTGLRDKSKTANMLSMLVKQG
IAIPFLTRNGSNIQLNAICGVKDGNKYLGAVIVSQYINIKLLNNLAKNTGTSVQLYSNKKLVLGNVSSESLKNINLITED
VRKQFNNKASLNYLIDKKTIGGESYLINYIPLKDYFSQPIGYFVLMASQGHVNVTKHNLLIKTLMSAALFTIISFIIISL
ISRSITVPLNKITKATKKVAAGDLTQTVTTGTGDQLAVLTDNFNKMITNLRKMVESLVESSRDILRMSTGLSKNSSKASE
ASQEVAAASGEIANGTEAQARQISKTTELLSDINKQAKNVSQGSTRIIDSIEGAYNKSHTSLEVMDRVSRNMQVVMEEVK
KTNSRVASLEGKVKKINNIIEAINYLNEETTLLSLNASIEAARAGEAGRGFAVVAEEIKRLADESNKFLEEVNNIFGEIN
EAMKSVVESMDKSSQLINNSEEDVTGAKHVLDEIQQVITNAKHVSEEIHTYIEEQLEGTRNVASAIDEINGIAQNNASQT
RKAVELNKEHSRFVKHISEAADDLSVMANQLEMLVSKFILK
>Mature_680_residues
TNNRIFYLLKAIFGRLESFFIKILTRINIGKRLMVFSLILIISIVALSSWQSINTFSNYVSSKQKEKLIENYNVVHSMLE
ETKSKYTGYSKTIARLEEVKKLLRGSGNDDILSELKQELQVGGIELRDQDFKVVSATGVTGLRDKSKTANMLSMLVKQGI
AIPFLTRNGSNIQLNAICGVKDGNKYLGAVIVSQYINIKLLNNLAKNTGTSVQLYSNKKLVLGNVSSESLKNINLITEDV
RKQFNNKASLNYLIDKKTIGGESYLINYIPLKDYFSQPIGYFVLMASQGHVNVTKHNLLIKTLMSAALFTIISFIIISLI
SRSITVPLNKITKATKKVAAGDLTQTVTTGTGDQLAVLTDNFNKMITNLRKMVESLVESSRDILRMSTGLSKNSSKASEA
SQEVAAASGEIANGTEAQARQISKTTELLSDINKQAKNVSQGSTRIIDSIEGAYNKSHTSLEVMDRVSRNMQVVMEEVKK
TNSRVASLEGKVKKINNIIEAINYLNEETTLLSLNASIEAARAGEAGRGFAVVAEEIKRLADESNKFLEEVNNIFGEINE
AMKSVVESMDKSSQLINNSEEDVTGAKHVLDEIQQVITNAKHVSEEIHTYIEEQLEGTRNVASAIDEINGIAQNNASQTR
KAVELNKEHSRFVKHISEAADDLSVMANQLEMLVSKFILK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=363, Percent_Identity=25.8953168044077, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=385, Percent_Identity=24.4155844155844, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1788195, Length=325, Percent_Identity=26.4615384615385, Blast_Score=97, Evalue=5e-21,
Organism=Escherichia coli, GI1788194, Length=367, Percent_Identity=27.5204359673025, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1789453, Length=267, Percent_Identity=26.2172284644195, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75301; Mature: 75170

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNRIFYLLKAIFGRLESFFIKILTRINIGKRLMVFSLILIISIVALSSWQSINTFSNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VSSKQKEKLIENYNVVHSMLEETKSKYTGYSKTIARLEEVKKLLRGSGNDDILSELKQEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QVGGIELRDQDFKVVSATGVTGLRDKSKTANMLSMLVKQGIAIPFLTRNGSNIQLNAICG
HHCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEE
VKDGNKYLGAVIVSQYINIKLLNNLAKNTGTSVQLYSNKKLVLGNVSSESLKNINLITED
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHH
VRKQFNNKASLNYLIDKKTIGGESYLINYIPLKDYFSQPIGYFVLMASQGHVNVTKHNLL
HHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHCCCHHEEEEEECCCCEEEHHHHHH
IKTLMSAALFTIISFIIISLISRSITVPLNKITKATKKVAAGDLTQTVTTGTGDQLAVLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEE
DNFNKMITNLRKMVESLVESSRDILRMSTGLSKNSSKASEASQEVAAASGEIANGTEAQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
RQISKTTELLSDINKQAKNVSQGSTRIIDSIEGAYNKSHTSLEVMDRVSRNMQVVMEEVK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KTNSRVASLEGKVKKINNIIEAINYLNEETTLLSLNASIEAARAGEAGRGFAVVAEEIKR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHH
LADESNKFLEEVNNIFGEINEAMKSVVESMDKSSQLINNSEEDVTGAKHVLDEIQQVITN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AKHVSEEIHTYIEEQLEGTRNVASAIDEINGIAQNNASQTRKAVELNKEHSRFVKHISEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHH
ADDLSVMANQLEMLVSKFILK
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNNRIFYLLKAIFGRLESFFIKILTRINIGKRLMVFSLILIISIVALSSWQSINTFSNY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VSSKQKEKLIENYNVVHSMLEETKSKYTGYSKTIARLEEVKKLLRGSGNDDILSELKQEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QVGGIELRDQDFKVVSATGVTGLRDKSKTANMLSMLVKQGIAIPFLTRNGSNIQLNAICG
HHCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEE
VKDGNKYLGAVIVSQYINIKLLNNLAKNTGTSVQLYSNKKLVLGNVSSESLKNINLITED
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHH
VRKQFNNKASLNYLIDKKTIGGESYLINYIPLKDYFSQPIGYFVLMASQGHVNVTKHNLL
HHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHCCCHHEEEEEECCCCEEEHHHHHH
IKTLMSAALFTIISFIIISLISRSITVPLNKITKATKKVAAGDLTQTVTTGTGDQLAVLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEE
DNFNKMITNLRKMVESLVESSRDILRMSTGLSKNSSKASEASQEVAAASGEIANGTEAQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
RQISKTTELLSDINKQAKNVSQGSTRIIDSIEGAYNKSHTSLEVMDRVSRNMQVVMEEVK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KTNSRVASLEGKVKKINNIIEAINYLNEETTLLSLNASIEAARAGEAGRGFAVVAEEIKR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHH
LADESNKFLEEVNNIFGEINEAMKSVVESMDKSSQLINNSEEDVTGAKHVLDEIQQVITN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AKHVSEEIHTYIEEQLEGTRNVASAIDEINGIAQNNASQTRKAVELNKEHSRFVKHISEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHH
ADDLSVMANQLEMLVSKFILK
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA