| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is aglG [H]
Identifier: 220932289
GI number: 220932289
Start: 1544382
End: 1545236
Strand: Reverse
Name: aglG [H]
Synonym: Hore_14530
Alternate gene names: 220932289
Gene position: 1545236-1544382 (Counterclockwise)
Preceding gene: 220932290
Following gene: 220932288
Centisome position: 59.94
GC content: 39.65
Gene sequence:
>855_bases ATGAATTTAAAGAAAGCAACCCCTAAAATTATATTAAACATTGTAATTATAGTCTTTATGTTGGTCTGGATTTTACCAAC ACTGGGGCTTTTGATTACTTCCTTCCGTCCAGCCCAGGATGTAAGTAAAACTGGATGGTGGAGTGTTTTAAGCAGTCCCC TTAAATTTACCCAGTTTACTGTTGAAAATTACCAGAAGGTACTGGGACAGGGTGGAATGGCTATGGCCTTTAGAAACAGT TTTTTGATAACTATTATGGGAACCCTTATACCTGTTGCAGTTGCTGCCTTTGCAGCCTTTGGCCTTTCCAGATTACATTT TAAAGGTAGAAGTTTCTTTTATGGTTTAATTGTAAGTCTACTGGTAGTACCCCTCCAGATGACCTTTATACCTGTTTTAA AATTATATAATACCCTGAACCTGTCGGGTTCCTTTGTGGGATTATGGCTGGTTCACACTGGTTATGGCCTACCATTTGCT GTATTTATGCTTCATAATTTCTTCCAGTCTTTACCCCAGGACCTTTTTGAAGCTGCCTATATAGATGGGGCTTCTGTCTG GACTGTTTTTTATAAACTGGCGTTACCGTTATCAGTTCCAGCCATTGCTTCCCTGATTATATTCCAGTTCCTGTGGGTCT GGAATGACCTTTTGGTGGCTTTAATATACCTTGGTGGCTTTGACAGGGTAGCTCCACTTACTGTTAAGTTATCAAGTCTG GTTGGTTCCTATGGTCAGAACTGGCACCTCTTAACATCAGCTGCCTTTGTTTCTATGATTGTTCCTTTGATAATATTCTT TACTTTACAGCGGTACTTTGTTAGAGGTATTCTGGCTGGTTCAGTTAAAGGTTAA
Upstream 100 bases:
>100_bases GGAACTATGGCAGGGCAAGTGCCATAGCGGTAGTTCTGTTTATGCTAATTATTCCAGCAATAGCCATGAATCTGAAGCGG ATGAAAGGGGATGAAAGCTA
Downstream 100 bases:
>100_bases TTATGTTATAAAAAGATAAAAATGTCAGACGTGCTTATATTAAATTAAATTTAGTATAGAGGGAGGTGGTTTTTTACCTT TTTTTATATTAAATATGGGT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNLKKATPKIILNIVIIVFMLVWILPTLGLLITSFRPAQDVSKTGWWSVLSSPLKFTQFTVENYQKVLGQGGMAMAFRNS FLITIMGTLIPVAVAAFAAFGLSRLHFKGRSFFYGLIVSLLVVPLQMTFIPVLKLYNTLNLSGSFVGLWLVHTGYGLPFA VFMLHNFFQSLPQDLFEAAYIDGASVWTVFYKLALPLSVPAIASLIIFQFLWVWNDLLVALIYLGGFDRVAPLTVKLSSL VGSYGQNWHLLTSAAFVSMIVPLIIFFTLQRYFVRGILAGSVKG
Sequences:
>Translated_284_residues MNLKKATPKIILNIVIIVFMLVWILPTLGLLITSFRPAQDVSKTGWWSVLSSPLKFTQFTVENYQKVLGQGGMAMAFRNS FLITIMGTLIPVAVAAFAAFGLSRLHFKGRSFFYGLIVSLLVVPLQMTFIPVLKLYNTLNLSGSFVGLWLVHTGYGLPFA VFMLHNFFQSLPQDLFEAAYIDGASVWTVFYKLALPLSVPAIASLIIFQFLWVWNDLLVALIYLGGFDRVAPLTVKLSSL VGSYGQNWHLLTSAAFVSMIVPLIIFFTLQRYFVRGILAGSVKG >Mature_284_residues MNLKKATPKIILNIVIIVFMLVWILPTLGLLITSFRPAQDVSKTGWWSVLSSPLKFTQFTVENYQKVLGQGGMAMAFRNS FLITIMGTLIPVAVAAFAAFGLSRLHFKGRSFFYGLIVSLLVVPLQMTFIPVLKLYNTLNLSGSFVGLWLVHTGYGLPFA VFMLHNFFQSLPQDLFEAAYIDGASVWTVFYKLALPLSVPAIASLIIFQFLWVWNDLLVALIYLGGFDRVAPLTVKLSSL VGSYGQNWHLLTSAAFVSMIVPLIIFFTLQRYFVRGILAGSVKG
Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=291, Percent_Identity=28.5223367697594, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1789860, Length=204, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=26.8867924528302, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787368, Length=177, Percent_Identity=24.8587570621469, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31589; Mature: 31589
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKKATPKIILNIVIIVFMLVWILPTLGLLITSFRPAQDVSKTGWWSVLSSPLKFTQFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH VENYQKVLGQGGMAMAFRNSFLITIMGTLIPVAVAAFAAFGLSRLHFKGRSFFYGLIVSL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LVVPLQMTFIPVLKLYNTLNLSGSFVGLWLVHTGYGLPFAVFMLHNFFQSLPQDLFEAAY HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IDGASVWTVFYKLALPLSVPAIASLIIFQFLWVWNDLLVALIYLGGFDRVAPLTVKLSSL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VGSYGQNWHLLTSAAFVSMIVPLIIFFTLQRYFVRGILAGSVKG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLKKATPKIILNIVIIVFMLVWILPTLGLLITSFRPAQDVSKTGWWSVLSSPLKFTQFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH VENYQKVLGQGGMAMAFRNSFLITIMGTLIPVAVAAFAAFGLSRLHFKGRSFFYGLIVSL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LVVPLQMTFIPVLKLYNTLNLSGSFVGLWLVHTGYGLPFAVFMLHNFFQSLPQDLFEAAY HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IDGASVWTVFYKLALPLSVPAIASLIIFQFLWVWNDLLVALIYLGGFDRVAPLTVKLSSL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VGSYGQNWHLLTSAAFVSMIVPLIIFFTLQRYFVRGILAGSVKG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]