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The map label for this gene is tsgA [H]

Identifier: 220931788

GI number: 220931788

Start: 1018045

End: 1019313

Strand: Direct

Name: tsgA [H]

Synonym: Hore_09450

Alternate gene names: 220931788

Gene position: 1018045-1019313 (Clockwise)

Preceding gene: 220931787

Following gene: 220931789

Centisome position: 39.49

GC content: 36.8

Gene sequence:

>1269_bases
ATGAATTTAACTCTTAAAAATGATAGAACCCGGATAACGATAATTGCTTATCTTTTGATTACTTTTATTGGTTTATGTGG
TGGCTCTCTAGGAATAATTATTACCTCAGCTGCTAAAGACCTGGGTGTAGATACTTCAGCTATTGCAGCTACATTTTCAT
TGTTTAGTCTCGGGAGTACAATAATGATTATTTCAACAACTGGTTTTGTCCTGAATTTCTTATCTATTAAGAAAACTATA
ATTCTAAAAACCCTGGTTCTGCTTACTGGTGGGGTTGCCATGTGGATGGCCCCAGGTATTAAAGTGTTTACATATGCTAT
CTTTCTGTATGGTTTTGGGGTTGGGACAGTCTATTCACTGGGTAATTATTTTATTGTCTCAATGTATGAAAACAAAGAGC
GTAATGCAAAATTAGCTTTCTTACTCTTTTTCTATAGTTTAGGTGCTACTGTTGCCCCCTATCTTGGAGGGGTTATGCTT
GAAGCAGGCCTTTCCTGGAAACTGGTTTTTACCTATTCACTGGTAGTAATTTTTCTGTCTTTTCTGCTATCCCTTGGAAC
TAAATTTGAAAATGTTATTACTCCTGTTAAAAAGAAAGAAGAAAATGATGATAGAGAAGTTGAACCCCCTGTTCTAGAAC
AGATTAAGAGCTGGCCCTTAAGTGTATGGGTACTGGTTATTGGATTGTTATGCTATGCTCTATCTGAAGTTTCGCTGACA
ACCTGGTTAACTGTATATGCTGAAAAAGGTCTTGGTATGAGACTGGCCAAAGCTGGTTTATTGACATCTATTTTCTGGAT
GTTTGTTGGTATTGGTAGGGCCGGGGCCAGTTATATTCTTAAAAAGATTACCGGAGAAGTTTATATTATGTGTGTATCTG
TTTTAACAATAATTGCTTTACTCATTTATGCTTATGCAGCTACCCCGGGTCTAATATTTGTGATTGTTGCTTTGCTCGGT
TTAGGTTTCTCCGCGATGAATTCAACTATTACTTCATTTGGTACCCTTCAGGTTAGAAAAACCACTTCAAAATTGGTAAC
TCTGTTCCTGGGGACAAGTTCTGTGGGACCAATCGTTGCTCCTGTTATTTCCAGTGGTATTAAAGCATCCTTTGGATTAA
GGGCTACAGTTGTGTCAAGTGCTATTTTTATGGGAATAGTATTTGTGGCTACCTTCATAACTGTTGTTATTAATAAAGCC
AGGAATTATGACCCTTATGCAGATGAAATTAAAGATAGTTCTGATAATAAAGCAGTAAATCCTGCTTAA

Upstream 100 bases:

>100_bases
GTTTTTATCACCCTGCAATAACTATATTAACAAGGCTTATAAGAGGAATTTATTTTTTTATAAAAAAATGTTCACGAGAA
CAAAAGGGGGGATTAAATAA

Downstream 100 bases:

>100_bases
GTTATATAAACAAACATTTAGTAAGCAAAGTTATTTAAGGAGGCTGAAGGAAATGACTAAAAAAGAGAAAAGCTGGTGGA
AAGAGGCGGTAGTTTATCAA

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNLTLKNDRTRITIIAYLLITFIGLCGGSLGIIITSAAKDLGVDTSAIAATFSLFSLGSTIMIISTTGFVLNFLSIKKTI
ILKTLVLLTGGVAMWMAPGIKVFTYAIFLYGFGVGTVYSLGNYFIVSMYENKERNAKLAFLLFFYSLGATVAPYLGGVML
EAGLSWKLVFTYSLVVIFLSFLLSLGTKFENVITPVKKKEENDDREVEPPVLEQIKSWPLSVWVLVIGLLCYALSEVSLT
TWLTVYAEKGLGMRLAKAGLLTSIFWMFVGIGRAGASYILKKITGEVYIMCVSVLTIIALLIYAYAATPGLIFVIVALLG
LGFSAMNSTITSFGTLQVRKTTSKLVTLFLGTSSVGPIVAPVISSGIKASFGLRATVVSSAIFMGIVFVATFITVVINKA
RNYDPYADEIKDSSDNKAVNPA

Sequences:

>Translated_422_residues
MNLTLKNDRTRITIIAYLLITFIGLCGGSLGIIITSAAKDLGVDTSAIAATFSLFSLGSTIMIISTTGFVLNFLSIKKTI
ILKTLVLLTGGVAMWMAPGIKVFTYAIFLYGFGVGTVYSLGNYFIVSMYENKERNAKLAFLLFFYSLGATVAPYLGGVML
EAGLSWKLVFTYSLVVIFLSFLLSLGTKFENVITPVKKKEENDDREVEPPVLEQIKSWPLSVWVLVIGLLCYALSEVSLT
TWLTVYAEKGLGMRLAKAGLLTSIFWMFVGIGRAGASYILKKITGEVYIMCVSVLTIIALLIYAYAATPGLIFVIVALLG
LGFSAMNSTITSFGTLQVRKTTSKLVTLFLGTSSVGPIVAPVISSGIKASFGLRATVVSSAIFMGIVFVATFITVVINKA
RNYDPYADEIKDSSDNKAVNPA
>Mature_422_residues
MNLTLKNDRTRITIIAYLLITFIGLCGGSLGIIITSAAKDLGVDTSAIAATFSLFSLGSTIMIISTTGFVLNFLSIKKTI
ILKTLVLLTGGVAMWMAPGIKVFTYAIFLYGFGVGTVYSLGNYFIVSMYENKERNAKLAFLLFFYSLGATVAPYLGGVML
EAGLSWKLVFTYSLVVIFLSFLLSLGTKFENVITPVKKKEENDDREVEPPVLEQIKSWPLSVWVLVIGLLCYALSEVSLT
TWLTVYAEKGLGMRLAKAGLLTSIFWMFVGIGRAGASYILKKITGEVYIMCVSVLTIIALLIYAYAATPGLIFVIVALLG
LGFSAMNSTITSFGTLQVRKTTSKLVTLFLGTSSVGPIVAPVISSGIKASFGLRATVVSSAIFMGIVFVATFITVVINKA
RNYDPYADEIKDSSDNKAVNPA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family [H]

Homologues:

Organism=Escherichia coli, GI1789764, Length=400, Percent_Identity=24.5, Blast_Score=124, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45551; Mature: 45551

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLKNDRTRITIIAYLLITFIGLCGGSLGIIITSAAKDLGVDTSAIAATFSLFSLGST
CCCEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECHHHCCCCHHHHHHHHHHHHCCCE
IMIISTTGFVLNFLSIKKTIILKTLVLLTGGVAMWMAPGIKVFTYAIFLYGFGVGTVYSL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GNYFIVSMYENKERNAKLAFLLFFYSLGATVAPYLGGVMLEAGLSWKLVFTYSLVVIFLS
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
FLLSLGTKFENVITPVKKKEENDDREVEPPVLEQIKSWPLSVWVLVIGLLCYALSEVSLT
HHHHHCCHHHHHHCCHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TWLTVYAEKGLGMRLAKAGLLTSIFWMFVGIGRAGASYILKKITGEVYIMCVSVLTIIAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYAYAATPGLIFVIVALLGLGFSAMNSTITSFGTLQVRKTTSKLVTLFLGTSSVGPIVA
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEHHHHHHHHHHCCCCCCCHHHH
PVISSGIKASFGLRATVVSSAIFMGIVFVATFITVVINKARNYDPYADEIKDSSDNKAVN
HHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC
PA
CC
>Mature Secondary Structure
MNLTLKNDRTRITIIAYLLITFIGLCGGSLGIIITSAAKDLGVDTSAIAATFSLFSLGST
CCCEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECHHHCCCCHHHHHHHHHHHHCCCE
IMIISTTGFVLNFLSIKKTIILKTLVLLTGGVAMWMAPGIKVFTYAIFLYGFGVGTVYSL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GNYFIVSMYENKERNAKLAFLLFFYSLGATVAPYLGGVMLEAGLSWKLVFTYSLVVIFLS
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
FLLSLGTKFENVITPVKKKEENDDREVEPPVLEQIKSWPLSVWVLVIGLLCYALSEVSLT
HHHHHCCHHHHHHCCHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TWLTVYAEKGLGMRLAKAGLLTSIFWMFVGIGRAGASYILKKITGEVYIMCVSVLTIIAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYAYAATPGLIFVIVALLGLGFSAMNSTITSFGTLQVRKTTSKLVTLFLGTSSVGPIVA
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEHHHHHHHHHHCCCCCCCHHHH
PVISSGIKASFGLRATVVSSAIFMGIVFVATFITVVINKARNYDPYADEIKDSSDNKAVN
HHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA