Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220931659

Identifier: 220931659

GI number: 220931659

Start: 876062

End: 877918

Strand: Direct

Name: 220931659

Synonym: Hore_08150

Alternate gene names: NA

Gene position: 876062-877918 (Clockwise)

Preceding gene: 220931658

Following gene: 220931660

Centisome position: 33.98

GC content: 36.73

Gene sequence:

>1857_bases
ATGTTTTATTCAAAGTTTTACAATTTTGTGCTGATAGCTTTAGTAGTTATATTTATTCCTGTAATAGTTGAAGCCAGGAC
CATTATAGAAGATTACCAGCTGGTTGTATATGGGGGAGAGCCAGAAGGAGTTATGGCTGCTGTTTCAGCAGCCAGGTCAG
GGGTTAAGACTCTGCTGGTTATGGAAAGGGATAAACCGGGTGGTTTGATGGTATACGGTGGTTTAAATTATCTTGATTTG
AATTATTCACCTCATGGAGGTAATTTAAATAAAGGTCTTTTTCAGGAATGGCACCAGAGAGTTGGTGGTCAGGTAGCTTT
TGGAATAGATAAGGCAATATCTGTATTTCAGAATATGCTGGCTTCTGAAAAAAATATTAAGGTTATGAATAATACAGAAC
TTATAAAAATAAAGAAAGAAAAGGGATATATAAATAGTCTTATATTAAGGGAAAAAGGTAAGTTAATCGAAGTTAAAGCC
AGTTATTTTATAGATTCAAGCCAGGAGGCCCATCTTGCAGTAAGAGCCGGGGCACCCTATTTTGAAAATGGTGCTGATAT
TGGTTTGCCAGAACGCCATATGGCTGTGACCCTGGTATTACATATAGGTAATATAAATTATGAAGGACTGGTAAAGGCTG
TTAAGGATGGCAAATTTGGACCAGCTCATATTAATCATAATCACGCCTGGGGTTTTGTTAGAATCGGGGACATGTATAAA
CCCCATGATAAAAATATAAAGCTCAGGGGTCTTAACATTGTATTTGAGAAAAATGACAAGGGCCAGCTTGAAGCCTATAT
TAATTCTATGTTGATTTTCGGGGTTGATCCCCTTGATAAAACCTCTTTAAAAGATGCTTATAAAAGGGGAAAAAAAGAAG
CGGCACATGTCCTTGCTTTTTTAAAAAAACAGGTAGATGGTTTTGAAAGGGCTGTCTTGATGGATTTTCCCCAGGAGTTA
TATATCAGGGAAGGAAGACATATTTTAGCCAGATACCAGTTAAAGACTGTAGATTTGCTGGAAAATAAAATTTTTGAAGA
TACAGTGGCTTTAGCATCTTATCCCCTTGATTATCAGGCTTATACACCTGAATTTGCCGGGTTTGTTCTTTTTAATCCTG
TAGTGTATGGTATTCCCATGCGTTCATTAATTCCCAAAAACCTTAAGAATGTTATGGTAGTTGGCAGAAGCAGTGGTTAT
AGTTCTCTGGCAGCTGCTAGTGCCAGGGTTTTACCTACAGGTATGGCCTGTGGTGAGGCAGCAGGTTTAATAACTTATTA
TGCACATAAATCAAACTTAACCTATGCTGAAATTACTGACCATAGAGAAATAATTAGAAAAGTTCAAAAATCGTTAGGGA
TTTATAGAGATATTAACTATTATGAAGATTTTGTCGATCACATCATAGAAGATAGTGTTGTCAGACCCTATTTAGAAGAG
CTGTTATCCTGGGGGCTTGTTGTAGCCGGATACAGGAATGATTTTAAATTAACAGAGATAATCAGGGAGAAGCAGTTTGC
TTATATTATTATAAAGGGTTTAAGGCAACGACAGGCCCCGAATTTATGTGAATGGGTTCCAGAAAGTATTATAACACTTT
CAACTAACAGTTATTTAACCCGGGATCGGGCTGCCATGTTACTTCTTACAGCATGTGGTGAAAAAGTTCTTAACATGGAA
GTAGATGAATATTATAATAAGGCCTGCCAGATGGATTTGATTTCCAACAAATTTAGTAAAATGGTTCCTGATAATAGATT
ATTGACCAGGCGGGAAGCCTATATGTTGCTGGGGTATTTTTTAAGAAAATTTGATATACCCGAATCTTTAAAAAGATTCA
GGGGTGAAATAAAGTGA

Upstream 100 bases:

>100_bases
TATCAGGGATGTTATTCCCTTTCCCAGAACTCCCGGTAATGCCAAATTTTAAGATATATGAGAGGGGGGTATCCCCTCTC
CTTTTTTCAGGAGGTTGGAA

Downstream 100 bases:

>100_bases
TAAAAAATTATTATCCTTCTCCACTGGGTTTAATGGAAATTACATTATCTTTAGATGGTCTGGTAAGCATAACCTTTGTT
AAAAATGTAGACAATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Thiamine Biosynthesis Thi4 Protein; FAD Dependent Oxidoreductase Domain Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MFYSKFYNFVLIALVVIFIPVIVEARTIIEDYQLVVYGGEPEGVMAAVSAARSGVKTLLVMERDKPGGLMVYGGLNYLDL
NYSPHGGNLNKGLFQEWHQRVGGQVAFGIDKAISVFQNMLASEKNIKVMNNTELIKIKKEKGYINSLILREKGKLIEVKA
SYFIDSSQEAHLAVRAGAPYFENGADIGLPERHMAVTLVLHIGNINYEGLVKAVKDGKFGPAHINHNHAWGFVRIGDMYK
PHDKNIKLRGLNIVFEKNDKGQLEAYINSMLIFGVDPLDKTSLKDAYKRGKKEAAHVLAFLKKQVDGFERAVLMDFPQEL
YIREGRHILARYQLKTVDLLENKIFEDTVALASYPLDYQAYTPEFAGFVLFNPVVYGIPMRSLIPKNLKNVMVVGRSSGY
SSLAAASARVLPTGMACGEAAGLITYYAHKSNLTYAEITDHREIIRKVQKSLGIYRDINYYEDFVDHIIEDSVVRPYLEE
LLSWGLVVAGYRNDFKLTEIIREKQFAYIIIKGLRQRQAPNLCEWVPESIITLSTNSYLTRDRAAMLLLTACGEKVLNME
VDEYYNKACQMDLISNKFSKMVPDNRLLTRREAYMLLGYFLRKFDIPESLKRFRGEIK

Sequences:

>Translated_618_residues
MFYSKFYNFVLIALVVIFIPVIVEARTIIEDYQLVVYGGEPEGVMAAVSAARSGVKTLLVMERDKPGGLMVYGGLNYLDL
NYSPHGGNLNKGLFQEWHQRVGGQVAFGIDKAISVFQNMLASEKNIKVMNNTELIKIKKEKGYINSLILREKGKLIEVKA
SYFIDSSQEAHLAVRAGAPYFENGADIGLPERHMAVTLVLHIGNINYEGLVKAVKDGKFGPAHINHNHAWGFVRIGDMYK
PHDKNIKLRGLNIVFEKNDKGQLEAYINSMLIFGVDPLDKTSLKDAYKRGKKEAAHVLAFLKKQVDGFERAVLMDFPQEL
YIREGRHILARYQLKTVDLLENKIFEDTVALASYPLDYQAYTPEFAGFVLFNPVVYGIPMRSLIPKNLKNVMVVGRSSGY
SSLAAASARVLPTGMACGEAAGLITYYAHKSNLTYAEITDHREIIRKVQKSLGIYRDINYYEDFVDHIIEDSVVRPYLEE
LLSWGLVVAGYRNDFKLTEIIREKQFAYIIIKGLRQRQAPNLCEWVPESIITLSTNSYLTRDRAAMLLLTACGEKVLNME
VDEYYNKACQMDLISNKFSKMVPDNRLLTRREAYMLLGYFLRKFDIPESLKRFRGEIK
>Mature_618_residues
MFYSKFYNFVLIALVVIFIPVIVEARTIIEDYQLVVYGGEPEGVMAAVSAARSGVKTLLVMERDKPGGLMVYGGLNYLDL
NYSPHGGNLNKGLFQEWHQRVGGQVAFGIDKAISVFQNMLASEKNIKVMNNTELIKIKKEKGYINSLILREKGKLIEVKA
SYFIDSSQEAHLAVRAGAPYFENGADIGLPERHMAVTLVLHIGNINYEGLVKAVKDGKFGPAHINHNHAWGFVRIGDMYK
PHDKNIKLRGLNIVFEKNDKGQLEAYINSMLIFGVDPLDKTSLKDAYKRGKKEAAHVLAFLKKQVDGFERAVLMDFPQEL
YIREGRHILARYQLKTVDLLENKIFEDTVALASYPLDYQAYTPEFAGFVLFNPVVYGIPMRSLIPKNLKNVMVVGRSSGY
SSLAAASARVLPTGMACGEAAGLITYYAHKSNLTYAEITDHREIIRKVQKSLGIYRDINYYEDFVDHIIEDSVVRPYLEE
LLSWGLVVAGYRNDFKLTEIIREKQFAYIIIKGLRQRQAPNLCEWVPESIITLSTNSYLTRDRAAMLLLTACGEKVLNME
VDEYYNKACQMDLISNKFSKMVPDNRLLTRREAYMLLGYFLRKFDIPESLKRFRGEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70151; Mature: 70151

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYSKFYNFVLIALVVIFIPVIVEARTIIEDYQLVVYGGEPEGVMAAVSAARSGVKTLLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEE
MERDKPGGLMVYGGLNYLDLNYSPHGGNLNKGLFQEWHQRVGGQVAFGIDKAISVFQNML
EECCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECHHHHHHHHHHHH
ASEKNIKVMNNTELIKIKKEKGYINSLILREKGKLIEVKASYFIDSSQEAHLAVRAGAPY
CCCCCEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCEEEEEECCCC
FENGADIGLPERHMAVTLVLHIGNINYEGLVKAVKDGKFGPAHINHNHAWGFVRIGDMYK
CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC
PHDKNIKLRGLNIVFEKNDKGQLEAYINSMLIFGVDPLDKTSLKDAYKRGKKEAAHVLAF
CCCCCEEEEEEEEEEECCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHH
LKKQVDGFERAVLMDFPQELYIREGRHILARYQLKTVDLLENKIFEDTVALASYPLDYQA
HHHHHHHHHHHHHHCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YTPEFAGFVLFNPVVYGIPMRSLIPKNLKNVMVVGRSSGYSSLAAASARVLPTGMACGEA
CCCCCCCCEEECCHHHCCCHHHHCHHCCCCEEEEECCCCCHHHHHHCHHHCCCCCCCCCC
AGLITYYAHKSNLTYAEITDHREIIRKVQKSLGIYRDINYYEDFVDHIIEDSVVRPYLEE
CCEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
LLSWGLVVAGYRNDFKLTEIIREKQFAYIIIKGLRQRQAPNLCEWVPESIITLSTNSYLT
HHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCHH
RDRAAMLLLTACGEKVLNMEVDEYYNKACQMDLISNKFSKMVPDNRLLTRREAYMLLGYF
HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LRKFDIPESLKRFRGEIK
HHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MFYSKFYNFVLIALVVIFIPVIVEARTIIEDYQLVVYGGEPEGVMAAVSAARSGVKTLLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEE
MERDKPGGLMVYGGLNYLDLNYSPHGGNLNKGLFQEWHQRVGGQVAFGIDKAISVFQNML
EECCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECHHHHHHHHHHHH
ASEKNIKVMNNTELIKIKKEKGYINSLILREKGKLIEVKASYFIDSSQEAHLAVRAGAPY
CCCCCEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCEEEEEECCCC
FENGADIGLPERHMAVTLVLHIGNINYEGLVKAVKDGKFGPAHINHNHAWGFVRIGDMYK
CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC
PHDKNIKLRGLNIVFEKNDKGQLEAYINSMLIFGVDPLDKTSLKDAYKRGKKEAAHVLAF
CCCCCEEEEEEEEEEECCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHH
LKKQVDGFERAVLMDFPQELYIREGRHILARYQLKTVDLLENKIFEDTVALASYPLDYQA
HHHHHHHHHHHHHHCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YTPEFAGFVLFNPVVYGIPMRSLIPKNLKNVMVVGRSSGYSSLAAASARVLPTGMACGEA
CCCCCCCCEEECCHHHCCCHHHHCHHCCCCEEEEECCCCCHHHHHHCHHHCCCCCCCCCC
AGLITYYAHKSNLTYAEITDHREIIRKVQKSLGIYRDINYYEDFVDHIIEDSVVRPYLEE
CCEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
LLSWGLVVAGYRNDFKLTEIIREKQFAYIIIKGLRQRQAPNLCEWVPESIITLSTNSYLT
HHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCHH
RDRAAMLLLTACGEKVLNMEVDEYYNKACQMDLISNKFSKMVPDNRLLTRREAYMLLGYF
HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LRKFDIPESLKRFRGEIK
HHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA