| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yhaO [H]
Identifier: 220931481
GI number: 220931481
Start: 686113
End: 687507
Strand: Direct
Name: yhaO [H]
Synonym: Hore_06370
Alternate gene names: 220931481
Gene position: 686113-687507 (Clockwise)
Preceding gene: 220931480
Following gene: 220931482
Centisome position: 26.61
GC content: 37.92
Gene sequence:
>1395_bases ATGGTGGAGGAGATATCTATGGATGAATTAAAATTTATTCATGCGTCTGATATACACCTGGGGAGTGTATTACATACAGG GACAACACATAAAGGGGATATTGGGGAAATTGTTAAAAAGGCTACCTATAAGGCATTTTCCAGGATCTGTAATCACGCAA TTGAATTTGAGGTAGATTTTGTTGTATTGTCCGGTGATATTTTTGATAGAGAGTCAAAATCAGTAGTTGCCATGAAACAT TTTATAGGGGAATGTAAAAGGTTAAATGAAAAAGGTATTCCTGTATACCTGATTGCCGGTAATCATGATCCATTGCGGGA ACAGGTGAATATTATGGATTTACCCCCTGATGTATTTATCTTCAGTGGAGATGAAGTAGAAAAGGAAGATTTTATTTCAG ATGATGGCAGGATTTTAGCCAGACTTATCGGACAATCTTATAAATCAAGGGCCCTTTCTGAAAAGATTCACCTTCAATAT AACTCAGGAGAAAAAAGTGGGGTCTGGAACATTGGTTTATTGCATACCCAGCTTGAACCCGGTAACAAGAATTATATACC ATGTTCTTTACAGGAGTTAAATGAGATTAATAATATACATTACTGGGCCCTGGGCCATATTCACCAATGTAAAATTTTAC AACAGGGATTGCCAACCATAGCCTATCCAGGTATTCCCCAGGGTCGTGATTTTGGGGAGCAAGGTCCGGGAGGATGTCTT CTTGTAAACCTTGTACCTGAGAAATCCCCTGCTGTTAAATTTGTACCTGTATCCCCGGTTATCTGGAAAAGGATTGAAGT TAAGATAGGTGAAGGAAATACTGGTAAGGAAAACGAGAATCCACGTAATATTACAGAACTCCAGGAACTTTTATATAAAA AAGCCAGGGATTTAGTAAATGACATTCAGTTAAAGCCCCAGGGTTTAGATATACCGGCTGTTAAGACTGAAAATGTTGTT GAAGGTCTTGTAATTCAGTGGGTTATAACCGGTCGCAGTCATATTCATAACCTGTTGCAGGAGCAGGACGATGAGGAGAT AGAGGAAGTTCTAATAGAGGGATTAAAATCTTTTCATGAAAGCAGACCTTTTCTCTGGACTGATTCTATTATTATAAGGA CCGGTAAGCCTCTACCTGACATGAATATAATGAAAAAACACAATCCTGTATTTCAGGAAATAGAAAATATATCTTTTGAT ATTCTCGGGAAAGAAGAATTACAAAAAGAACTACTGGAAGAACTGGGTCAGGTCTGGGAACTGGCTGAAGATCATGAGAA TATTAATGAAACAAAGATACAATTGGATAAAGAAACCATGAAAACAATTATTGATCAGGCCCGACATCTGGTAATAGAAA AAATTTTAGAGAGGGGGGGCTGGGGTGAGGATTAA
Upstream 100 bases:
>100_bases AAAAGTTGCGGTTTTTTATACCCGTGGTAAGATACCGGGTATTATTTTTTAATGTCTTTATATAAAAAGCAGGAGATAAG GTAAAAACCGGAGAATTCCT
Downstream 100 bases:
>100_bases GAGTCTTTATATAAAGGATTTTGGTATCTTCCGGGAGCAGAAGCTGGAAAAGATAGCTCCAGGTATGGTTGTGATTGGTG GCCCCAATAGAGCTGGAAAA
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MVEEISMDELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDIFDRESKSVVAMKH FIGECKRLNEKGIPVYLIAGNHDPLREQVNIMDLPPDVFIFSGDEVEKEDFISDDGRILARLIGQSYKSRALSEKIHLQY NSGEKSGVWNIGLLHTQLEPGNKNYIPCSLQELNEINNIHYWALGHIHQCKILQQGLPTIAYPGIPQGRDFGEQGPGGCL LVNLVPEKSPAVKFVPVSPVIWKRIEVKIGEGNTGKENENPRNITELQELLYKKARDLVNDIQLKPQGLDIPAVKTENVV EGLVIQWVITGRSHIHNLLQEQDDEEIEEVLIEGLKSFHESRPFLWTDSIIIRTGKPLPDMNIMKKHNPVFQEIENISFD ILGKEELQKELLEELGQVWELAEDHENINETKIQLDKETMKTIIDQARHLVIEKILERGGWGED
Sequences:
>Translated_464_residues MVEEISMDELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDIFDRESKSVVAMKH FIGECKRLNEKGIPVYLIAGNHDPLREQVNIMDLPPDVFIFSGDEVEKEDFISDDGRILARLIGQSYKSRALSEKIHLQY NSGEKSGVWNIGLLHTQLEPGNKNYIPCSLQELNEINNIHYWALGHIHQCKILQQGLPTIAYPGIPQGRDFGEQGPGGCL LVNLVPEKSPAVKFVPVSPVIWKRIEVKIGEGNTGKENENPRNITELQELLYKKARDLVNDIQLKPQGLDIPAVKTENVV EGLVIQWVITGRSHIHNLLQEQDDEEIEEVLIEGLKSFHESRPFLWTDSIIIRTGKPLPDMNIMKKHNPVFQEIENISFD ILGKEELQKELLEELGQVWELAEDHENINETKIQLDKETMKTIIDQARHLVIEKILERGGWGED >Mature_464_residues MVEEISMDELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDIFDRESKSVVAMKH FIGECKRLNEKGIPVYLIAGNHDPLREQVNIMDLPPDVFIFSGDEVEKEDFISDDGRILARLIGQSYKSRALSEKIHLQY NSGEKSGVWNIGLLHTQLEPGNKNYIPCSLQELNEINNIHYWALGHIHQCKILQQGLPTIAYPGIPQGRDFGEQGPGGCL LVNLVPEKSPAVKFVPVSPVIWKRIEVKIGEGNTGKENENPRNITELQELLYKKARDLVNDIQLKPQGLDIPAVKTENVV EGLVIQWVITGRSHIHNLLQEQDDEEIEEVLIEGLKSFHESRPFLWTDSIIIRTGKPLPDMNIMKKHNPVFQEIENISFD ILGKEELQKELLEELGQVWELAEDHENINETKIQLDKETMKTIIDQARHLVIEKILERGGWGED
Specific function: Unknown
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR014576 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 52675; Mature: 52675
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEEISMDELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDF CCCCCCHHHHHEEEECCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE VVLSGDIFDRESKSVVAMKHFIGECKRLNEKGIPVYLIAGNHDPLREQVNIMDLPPDVFI EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCEEECCCCEEE FSGDEVEKEDFISDDGRILARLIGQSYKSRALSEKIHLQYNSGEKSGVWNIGLLHTQLEP ECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEECC GNKNYIPCSLQELNEINNIHYWALGHIHQCKILQQGLPTIAYPGIPQGRDFGEQGPGGCL CCCCCCCCCHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEE LVNLVPEKSPAVKFVPVSPVIWKRIEVKIGEGNTGKENENPRNITELQELLYKKARDLVN EEEEECCCCCCEEEEECCHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DIQLKPQGLDIPAVKTENVVEGLVIQWVITGRSHIHNLLQEQDDEEIEEVLIEGLKSFHE HCEECCCCCCCCCCCCHHHHHHEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SRPFLWTDSIIIRTGKPLPDMNIMKKHNPVFQEIENISFDILGKEELQKELLEELGQVWE CCCEEEECCEEEECCCCCCCCHHHHHCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHH LAEDHENINETKIQLDKETMKTIIDQARHLVIEKILERGGWGED HHHHHCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVEEISMDELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDF CCCCCCHHHHHEEEECCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE VVLSGDIFDRESKSVVAMKHFIGECKRLNEKGIPVYLIAGNHDPLREQVNIMDLPPDVFI EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCEEECCCCEEE FSGDEVEKEDFISDDGRILARLIGQSYKSRALSEKIHLQYNSGEKSGVWNIGLLHTQLEP ECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEECC GNKNYIPCSLQELNEINNIHYWALGHIHQCKILQQGLPTIAYPGIPQGRDFGEQGPGGCL CCCCCCCCCHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEE LVNLVPEKSPAVKFVPVSPVIWKRIEVKIGEGNTGKENENPRNITELQELLYKKARDLVN EEEEECCCCCCEEEEECCHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DIQLKPQGLDIPAVKTENVVEGLVIQWVITGRSHIHNLLQEQDDEEIEEVLIEGLKSFHE HCEECCCCCCCCCCCCHHHHHHEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SRPFLWTDSIIIRTGKPLPDMNIMKKHNPVFQEIENISFDILGKEELQKELLEELGQVWE CCCEEEECCEEEECCCCCCCCHHHHHCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHH LAEDHENINETKIQLDKETMKTIIDQARHLVIEKILERGGWGED HHHHHCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]