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The map label for this gene is spoVT [H]

Identifier: 220931480

GI number: 220931480

Start: 685707

End: 685967

Strand: Direct

Name: spoVT [H]

Synonym: Hore_06360

Alternate gene names: 220931480

Gene position: 685707-685967 (Clockwise)

Preceding gene: 220931477

Following gene: 220931481

Centisome position: 26.6

GC content: 34.87

Gene sequence:

>261_bases
ATGAAAGCTACTGGTATTGTAAGGAAAATTGACGATTTAGGTAGAGTTGTTATACCTAAAGAATTACGTAGAACTATGAA
TATCGAGAAGAAAGACCCTATGGAAATCTATGTTGATGAAGACACAATAATTCTCAAAAAATATGAACCGGCCTGTATTT
TCTGTGGAAATGCTGAAAACACTATTGATTATATGGGTAAGTTTATCTGTAAGGATTGCCTCAACGAAATGGTAGAAGTC
TCGAATGGTAAGAGTGCCTGA

Upstream 100 bases:

>100_bases
AATTCAGCAACATTTTATTTATTATGCCAAAATCCTACAAAAATATATTGACAAGTCATACAGATATTGCTATAATTATA
AAAAAGGAGGGGACAAACAT

Downstream 100 bases:

>100_bases
ACATAATTCTAAATTAAATACTTATTTCTGAGTACCGCAACTGTAAAAAGTTGCGGTTTTTTATACCCGTGGTAAGATAC
CGGGTATTATTTTTTAATGT

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKATGIVRKIDDLGRVVIPKELRRTMNIEKKDPMEIYVDEDTIILKKYEPACIFCGNAENTIDYMGKFICKDCLNEMVEV
SNGKSA

Sequences:

>Translated_86_residues
MKATGIVRKIDDLGRVVIPKELRRTMNIEKKDPMEIYVDEDTIILKKYEPACIFCGNAENTIDYMGKFICKDCLNEMVEV
SNGKSA
>Mature_86_residues
MKATGIVRKIDDLGRVVIPKELRRTMNIEKKDPMEIYVDEDTIILKKYEPACIFCGNAENTIDYMGKFICKDCLNEMVEV
SNGKSA

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 9805; Mature: 9805

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVRKIDDLGRVVIPKELRRTMNIEKKDPMEIYVDEDTIILKKYEPACIFCGNAEN
CCCCHHHHHHHHCCCEECCHHHHHHCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCC
TIDYMGKFICKDCLNEMVEVSNGKSA
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKATGIVRKIDDLGRVVIPKELRRTMNIEKKDPMEIYVDEDTIILKKYEPACIFCGNAEN
CCCCHHHHHHHHCCCEECCHHHHHHCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCC
TIDYMGKFICKDCLNEMVEVSNGKSA
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]