Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931448

Identifier: 220931448

GI number: 220931448

Start: 657612

End: 659366

Strand: Direct

Name: 220931448

Synonym: Hore_06040

Alternate gene names: NA

Gene position: 657612-659366 (Clockwise)

Preceding gene: 220931447

Following gene: 220931449

Centisome position: 25.51

GC content: 38.97

Gene sequence:

>1755_bases
GTGTTTTCAAGGTTTTTTACCAGCAATAAAGGATTAACCCTTATTGAGATATTAGTGGCCCTGGCTCTGGTAGGGATTGC
ATCTACAGCTATCTATGGCTTTTTAAATTTTACTGTTAATAACTATCAGGATGGAGAAGAAAAAATAAGGGTTCAGGATT
ATACCAGACTGGTAGCGGATGAGATTACTGAAGAACTGAGGGGAGTTACTTCAGCAAGACTAATAGAAGATGTAGACAGT
AGTGAAATTGATTCAGAGAATTATAACTATATGTATGTAAAACCGGATATTGATCTGGTGATAAAGAGGGTAAAAAACGA
ACTGGGTCTTATAGTTGAAGAAAAAATCCCCGGAGTATCGGGGGTAAAATATGTGGATCAGGCTGGCAATGTAATAAAAG
ATTTTACTCCTGATTATGAACTAACCTTTTTCATAGATGATGATAACCCCGGAGTGCTTCATTTTAATTTAGTGGAAGTT
AATAGTGGTTTTGAAGTGGAATCAGCTGTATATCTGATTAATATAGAAGGTGATATCAGTGGGGTCACTGAAGGAAAAAT
GCTTGAATACACATCACTTTATGATACGGGTGACCCCTTTGCCCATCTGGATTTCAATAAATTCTGGTATGAATGGTTGC
AGGAAAATTATCAGGATGAGGGTATGATTGGTGAGGGTGATTATGGTGTCAATTTTCCCCTGGATGGTGGGGAACTTACC
CTGACTATTACGGGTTCGGGTAATGCTGCAGCTGGAGGGGCTATGCTTTTAAAGGAATTAAATTCTGACCATTTTCCCGA
AGGGGCAGATATAACAAGCTTTGCGGTTGTTGTCGATGCCAGAAACCTTGATGTTGGTGAAGGCGGTTACGGGGTTCTAC
TAAGGGGGGAGGTAATTCAGGCCAGGGATAAAGATGGAGAAATACTTGAAAATCAGTATAATGATTATGGTTATATGTTC
CAGTTTGACCCCGGGGCCAGGGGGTTTGTGATCAGGAGGATAAAAGGAGGCTTTCATGATGTTGAAAATAATATTGGGGC
CTCTCTGATAACAGGTAATGGTTATAACACCCGTTTCGGTGCACCTTATGCTCCGGAACACCTGGTTAATGATGTCTTTC
ACTGGAGTGGTTATCAGGACTGGTTTAAAAGGTATAAAACTGTAATAAAAGTTCAGACCCAGCCCGGTGGTGATTTAATA
TTGAGGGCACATCTTATTGACGAGGATGGTCACAGATCAGATGAAATGATCTTTGGTGATTTTAATAAACTGACGCTTAT
CGGTAAATATGGGGAAGAGAATATATTTGATGGCAGAAAGCTCGATTATGATTACTGGAGTAATGAAGATGTAACCCTCC
CTGGTAATATTATCGGGCTCAGGAGCTGGGATATGCATAATAATGAACATACAACCGAGTTTTATGAAATTTCAATTGCC
CCGGCTGAACCCGGTGTGATAGATATAGATTATGATAATAAAGTAATTACATTAACTTTTGATGAAGAGGTAATAGCCGA
TGATTTATCATTATTAACTGGTAATTTTATAATTACAAGGGTTACTAATAATATGGAATTTACTGTTTTCAGTATTGAAC
AGGGAAACACCACCAGGTCTATCGAATTAAATCTCAGTAGTGCCCTGGGCAAGGGAACCTATCTTATCAGTTATAGCAGA
CCAGCTTCAGGGGGACTTGCCGATTCGGAAGGAAATTTAGTTGAAGATTTTGATAGATATCTGGAAATTAACTAA

Upstream 100 bases:

>100_bases
ATAACGGGGATAGCTGGGAATGGCAGGATGTTTATACCGGTAGTGGGTATGTGAGACTAAATGATGTGGTGGCCCGGTAG
ACCAATCGGAGGTGGTTACT

Downstream 100 bases:

>100_bases
TCTGGAAAATTTTCAAGTTTCCATTAAAATCAATAATTACAAGACTCAAATTACCTAAATCGTTTAATTTTCAAATGAGG
TGAGAGGATATGTTTTTTGG

Product: prepilin-type N-terminal cleavage/methylation domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MFSRFFTSNKGLTLIEILVALALVGIASTAIYGFLNFTVNNYQDGEEKIRVQDYTRLVADEITEELRGVTSARLIEDVDS
SEIDSENYNYMYVKPDIDLVIKRVKNELGLIVEEKIPGVSGVKYVDQAGNVIKDFTPDYELTFFIDDDNPGVLHFNLVEV
NSGFEVESAVYLINIEGDISGVTEGKMLEYTSLYDTGDPFAHLDFNKFWYEWLQENYQDEGMIGEGDYGVNFPLDGGELT
LTITGSGNAAAGGAMLLKELNSDHFPEGADITSFAVVVDARNLDVGEGGYGVLLRGEVIQARDKDGEILENQYNDYGYMF
QFDPGARGFVIRRIKGGFHDVENNIGASLITGNGYNTRFGAPYAPEHLVNDVFHWSGYQDWFKRYKTVIKVQTQPGGDLI
LRAHLIDEDGHRSDEMIFGDFNKLTLIGKYGEENIFDGRKLDYDYWSNEDVTLPGNIIGLRSWDMHNNEHTTEFYEISIA
PAEPGVIDIDYDNKVITLTFDEEVIADDLSLLTGNFIITRVTNNMEFTVFSIEQGNTTRSIELNLSSALGKGTYLISYSR
PASGGLADSEGNLVEDFDRYLEIN

Sequences:

>Translated_584_residues
MFSRFFTSNKGLTLIEILVALALVGIASTAIYGFLNFTVNNYQDGEEKIRVQDYTRLVADEITEELRGVTSARLIEDVDS
SEIDSENYNYMYVKPDIDLVIKRVKNELGLIVEEKIPGVSGVKYVDQAGNVIKDFTPDYELTFFIDDDNPGVLHFNLVEV
NSGFEVESAVYLINIEGDISGVTEGKMLEYTSLYDTGDPFAHLDFNKFWYEWLQENYQDEGMIGEGDYGVNFPLDGGELT
LTITGSGNAAAGGAMLLKELNSDHFPEGADITSFAVVVDARNLDVGEGGYGVLLRGEVIQARDKDGEILENQYNDYGYMF
QFDPGARGFVIRRIKGGFHDVENNIGASLITGNGYNTRFGAPYAPEHLVNDVFHWSGYQDWFKRYKTVIKVQTQPGGDLI
LRAHLIDEDGHRSDEMIFGDFNKLTLIGKYGEENIFDGRKLDYDYWSNEDVTLPGNIIGLRSWDMHNNEHTTEFYEISIA
PAEPGVIDIDYDNKVITLTFDEEVIADDLSLLTGNFIITRVTNNMEFTVFSIEQGNTTRSIELNLSSALGKGTYLISYSR
PASGGLADSEGNLVEDFDRYLEIN
>Mature_584_residues
MFSRFFTSNKGLTLIEILVALALVGIASTAIYGFLNFTVNNYQDGEEKIRVQDYTRLVADEITEELRGVTSARLIEDVDS
SEIDSENYNYMYVKPDIDLVIKRVKNELGLIVEEKIPGVSGVKYVDQAGNVIKDFTPDYELTFFIDDDNPGVLHFNLVEV
NSGFEVESAVYLINIEGDISGVTEGKMLEYTSLYDTGDPFAHLDFNKFWYEWLQENYQDEGMIGEGDYGVNFPLDGGELT
LTITGSGNAAAGGAMLLKELNSDHFPEGADITSFAVVVDARNLDVGEGGYGVLLRGEVIQARDKDGEILENQYNDYGYMF
QFDPGARGFVIRRIKGGFHDVENNIGASLITGNGYNTRFGAPYAPEHLVNDVFHWSGYQDWFKRYKTVIKVQTQPGGDLI
LRAHLIDEDGHRSDEMIFGDFNKLTLIGKYGEENIFDGRKLDYDYWSNEDVTLPGNIIGLRSWDMHNNEHTTEFYEISIA
PAEPGVIDIDYDNKVITLTFDEEVIADDLSLLTGNFIITRVTNNMEFTVFSIEQGNTTRSIELNLSSALGKGTYLISYSR
PASGGLADSEGNLVEDFDRYLEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65407; Mature: 65407

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRFFTSNKGLTLIEILVALALVGIASTAIYGFLNFTVNNYQDGEEKIRVQDYTRLVAD
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEEHHHHHHHHHH
EITEELRGVTSARLIEDVDSSEIDSENYNYMYVKPDIDLVIKRVKNELGLIVEEKIPGVS
HHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCEEEEECCCCCC
GVKYVDQAGNVIKDFTPDYELTFFIDDDNPGVLHFNLVEVNSGFEVESAVYLINIEGDIS
CCHHHHHCCCCHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCC
GVTEGKMLEYTSLYDTGDPFAHLDFNKFWYEWLQENYQDEGMIGEGDYGVNFPLDGGELT
CCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCEEE
LTITGSGNAAAGGAMLLKELNSDHFPEGADITSFAVVVDARNLDVGEGGYGVLLRGEVIQ
EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCEEE
ARDKDGEILENQYNDYGYMFQFDPGARGFVIRRIKGGFHDVENNIGASLITGNGYNTRFG
CCCCCCCHHHHCCCCCEEEEEECCCCCCEEEEEECCCCHHHHCCCCCEEEECCCCCCCCC
APYAPEHLVNDVFHWSGYQDWFKRYKTVIKVQTQPGGDLILRAHLIDEDGHRSDEMIFGD
CCCCHHHHHHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEC
FNKLTLIGKYGEENIFDGRKLDYDYWSNEDVTLPGNIIGLRSWDMHNNEHTTEFYEISIA
CCEEEEEEECCCCCCCCCCEECCCCCCCCCEECCCCEEEEEEECCCCCCCCCEEEEEEEE
PAEPGVIDIDYDNKVITLTFDEEVIADDLSLLTGNFIITRVTNNMEFTVFSIEQGNTTRS
CCCCCEEEEECCCEEEEEEECCHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECCCCEEE
IELNLSSALGKGTYLISYSRPASGGLADSEGNLVEDFDRYLEIN
EEEEEHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHEECC
>Mature Secondary Structure
MFSRFFTSNKGLTLIEILVALALVGIASTAIYGFLNFTVNNYQDGEEKIRVQDYTRLVAD
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEEHHHHHHHHHH
EITEELRGVTSARLIEDVDSSEIDSENYNYMYVKPDIDLVIKRVKNELGLIVEEKIPGVS
HHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCEEEEECCCCCC
GVKYVDQAGNVIKDFTPDYELTFFIDDDNPGVLHFNLVEVNSGFEVESAVYLINIEGDIS
CCHHHHHCCCCHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCC
GVTEGKMLEYTSLYDTGDPFAHLDFNKFWYEWLQENYQDEGMIGEGDYGVNFPLDGGELT
CCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCEEE
LTITGSGNAAAGGAMLLKELNSDHFPEGADITSFAVVVDARNLDVGEGGYGVLLRGEVIQ
EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCEEE
ARDKDGEILENQYNDYGYMFQFDPGARGFVIRRIKGGFHDVENNIGASLITGNGYNTRFG
CCCCCCCHHHHCCCCCEEEEEECCCCCCEEEEEECCCCHHHHCCCCCEEEECCCCCCCCC
APYAPEHLVNDVFHWSGYQDWFKRYKTVIKVQTQPGGDLILRAHLIDEDGHRSDEMIFGD
CCCCHHHHHHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEC
FNKLTLIGKYGEENIFDGRKLDYDYWSNEDVTLPGNIIGLRSWDMHNNEHTTEFYEISIA
CCEEEEEEECCCCCCCCCCEECCCCCCCCCEECCCCEEEEEEECCCCCCCCCEEEEEEEE
PAEPGVIDIDYDNKVITLTFDEEVIADDLSLLTGNFIITRVTNNMEFTVFSIEQGNTTRS
CCCCCEEEEECCCEEEEEEECCHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECCCCEEE
IELNLSSALGKGTYLISYSRPASGGLADSEGNLVEDFDRYLEIN
EEEEEHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA