| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is eutJ [C]
Identifier: 220931449
GI number: 220931449
Start: 659456
End: 660514
Strand: Direct
Name: eutJ [C]
Synonym: Hore_06050
Alternate gene names: 220931449
Gene position: 659456-660514 (Clockwise)
Preceding gene: 220931448
Following gene: 220931450
Centisome position: 25.58
GC content: 40.79
Gene sequence:
>1059_bases ATGTTTTTTGGCAATAAAACAATAACAGCTGTAGATATTGGCAGTTATGCCATTAAGGCCGTCAAAATGAGAGCTGGTAA AAATGGACTCAATATTATAACAGCCGGTAGTCGCATTTTACCTGAAAAAGCTGTAAATCAGGGGGAAATACAGGATTATG CTGTGGTATCCAGGATTCTCAAGGATGTTCTGGAAGAGATTAACGGGAGTAAATATATTATAACAGCTGTTCCCGGAAAG AATTTAATAATAAGAAATATGGAAATGCCTTTAATAAGTGAAGAGGAATTAACAGAAGCCATTAAGTGGGAAGCCGATGA TTACTTACCCTTTCCTGTTGAGCAGGCCATGTTTGATTATATACTGCTATCAAAGGATGAGGAAAATATGTCGGTGTTGC TGGTAGCAGCCGAGAGGAAAACTATCAATGGGCTGGTAAAGATTTTTGATAACATAGGTCTAAAACCGGCTGTAATTAAT GCCCAGCCTATGGCTTTAATTTCTCTGCTTAAAATTCAGGGCCTTGTTGATGATACGGTGGCCCTTGTTGACGCCGGGGC TTCGGGAACACGGGTAATTATTGGTGATGGTAAAAATATTTACCTATCACGTAATATAGATATTGGTGGTAACCATTTTA CCGAAACCCTTATGGAGTCAAGAAACCTTGAATTCAGTGAAGCTGAAGAATATAAAAGAAAAGAAGGACTGGCAGCAGAT GATCAAAACGATAACAGTGCTGGTTTTACTGATTTAACTACCACTGGACTCGTTAAAACCCTGTCTGCCCTGGCTGACAG CCTGGCCGGGGAAATTTCCCGCTCCCTTGAATACTATTTTATGAAGTATAAGGATAATGATCTTGATAAGATTTTTTTCA CCGGGGGCTGTTCCCGGCTTAAAGGACTTGACAGGGTGATAAGTGAGGAAACAGGTGTCACGGTAGTTTCTATAGATCCC TTTGAATATTTTGATTTTGAAACCTGGGGTGAGGGGGCACCCGGTTTTTCGGTTGCTGTAGGACTCGGAGCTAGTGAGGT GCTTGGTAATGAGAATTAA
Upstream 100 bases:
>100_bases AAATTAACTAATCTGGAAAATTTTCAAGTTTCCATTAAAATCAATAATTACAAGACTCAAATTACCTAAATCGTTTAATT TTCAAATGAGGTGAGAGGAT
Downstream 100 bases:
>100_bases CTTTCTTCCGGAACAGAAAAAGGGAATTGAAATAAATTTAAAAAGTATTCTATTATTTCTATTATTTATGATTATTGTTG CCGGTCTGGGTGGGAGGTAT
Product: Tfp pilus assembly protein, ATPase PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Type Iv Pilus Assembly Protein Pilm; Fimbrial Assembly Protein PilM; Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Protein FtsA; Fimbrial Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Tfp Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbrial Assembly Family Protein; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; General Secretion Pathway Protein L; Type IV Pilus Biogenesis Protein TapM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRILKDVLEEINGSKYIITAVPGK NLIIRNMEMPLISEEELTEAIKWEADDYLPFPVEQAMFDYILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVIN AQPMALISLLKIQGLVDDTVALVDAGASGTRVIIGDGKNIYLSRNIDIGGNHFTETLMESRNLEFSEAEEYKRKEGLAAD DQNDNSAGFTDLTTTGLVKTLSALADSLAGEISRSLEYYFMKYKDNDLDKIFFTGGCSRLKGLDRVISEETGVTVVSIDP FEYFDFETWGEGAPGFSVAVGLGASEVLGNEN
Sequences:
>Translated_352_residues MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRILKDVLEEINGSKYIITAVPGK NLIIRNMEMPLISEEELTEAIKWEADDYLPFPVEQAMFDYILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVIN AQPMALISLLKIQGLVDDTVALVDAGASGTRVIIGDGKNIYLSRNIDIGGNHFTETLMESRNLEFSEAEEYKRKEGLAAD DQNDNSAGFTDLTTTGLVKTLSALADSLAGEISRSLEYYFMKYKDNDLDKIFFTGGCSRLKGLDRVISEETGVTVVSIDP FEYFDFETWGEGAPGFSVAVGLGASEVLGNEN >Mature_352_residues MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRILKDVLEEINGSKYIITAVPGK NLIIRNMEMPLISEEELTEAIKWEADDYLPFPVEQAMFDYILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVIN AQPMALISLLKIQGLVDDTVALVDAGASGTRVIIGDGKNIYLSRNIDIGGNHFTETLMESRNLEFSEAEEYKRKEGLAAD DQNDNSAGFTDLTTTGLVKTLSALADSLAGEISRSLEYYFMKYKDNDLDKIFFTGGCSRLKGLDRVISEETGVTVVSIDP FEYFDFETWGEGAPGFSVAVGLGASEVLGNEN
Specific function: Ethanolamine utilization. [C]
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38470; Mature: 38470
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRIL CCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEECCCEECCHHHCCCCCCHHHHHHHHHH KDVLEEINGSKYIITAVPGKNLIIRNMEMPLISEEELTEAIKWEADDYLPFPVEQAMFDY HHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH ILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVINAQPMALISLLKIQGLVDDTV HEECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCE ALVDAGASGTRVIIGDGKNIYLSRNIDIGGNHFTETLMESRNLEFSEAEEYKRKEGLAAD EEEECCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DQNDNSAGFTDLTTTGLVKTLSALADSLAGEISRSLEYYFMKYKDNDLDKIFFTGGCSRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCEEEEECCCHHH KGLDRVISEETGVTVVSIDPFEYFDFETWGEGAPGFSVAVGLGASEVLGNEN HHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCC >Mature Secondary Structure MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRIL CCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEECCCEECCHHHCCCCCCHHHHHHHHHH KDVLEEINGSKYIITAVPGKNLIIRNMEMPLISEEELTEAIKWEADDYLPFPVEQAMFDY HHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH ILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVINAQPMALISLLKIQGLVDDTV HEECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCE ALVDAGASGTRVIIGDGKNIYLSRNIDIGGNHFTETLMESRNLEFSEAEEYKRKEGLAAD EEEECCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DQNDNSAGFTDLTTTGLVKTLSALADSLAGEISRSLEYYFMKYKDNDLDKIFFTGGCSRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCEEEEECCCHHH KGLDRVISEETGVTVVSIDPFEYFDFETWGEGAPGFSVAVGLGASEVLGNEN HHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA