| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is ykvI [H]
Identifier: 220931358
GI number: 220931358
Start: 560037
End: 561044
Strand: Direct
Name: ykvI [H]
Synonym: Hore_05130
Alternate gene names: 220931358
Gene position: 560037-561044 (Clockwise)
Preceding gene: 220931355
Following gene: 220931362
Centisome position: 21.72
GC content: 46.23
Gene sequence:
>1008_bases GTGGTCGGAGCCGGTTTTGCTTCAGGTCAGGAGGTCCTTCAGTTTTTTGGTTTTTATGGTCTCGGGGGATTTGGCGGCCT GGTTTTAACGATTATGTTATTTGTTATTTATGGATATATCATCTTAAGCCTGGGCAGGGAATACAGGGCCCGTTCTCATC TTGAGGTGATTCGTTATGCCGGGGGCCGGTGGTTGAGTAAAGTTATTGATGGGGTTATTACTTTTTTTCTCTTTGGTGCT TTAACAGCAATGGTGGCCGGGTCAGGGGCTATTTTCCTGGAGCAGTTTGGTATTCCTTCCCTGTGGGGGAATATTGCTAT GATCGGAGCCTCAATACTGACAACTTTATTCGGAATTGGCGGAGTTATTTCTGCCATTAGTTTTGTAGTTCCCCTGCTTT TAACAGGTGTTTTTCTGGCTACCATAGCATCAGTTATAGGGGCTTTACCGGTAAACATAGCTGACCTCCATCAGGCTCTT CCGGGGAGGGCTCCGGTGCCACACTGGGCTTTATCCTCAGTTGTTTATGCATCCTATAATATTGTACTTGCTGTAGCAGT TCTGGCTCCCCTCGGGAGCAGGGTAAATGATAAGAGAAAGCTAAAGTATGGTGCTATTTTTGGTGGAGTGGGTTTAGGAC TGGGGGCCATGTTTATCCTTTTAGCGATACTGCTTAATATACCCCGGGTATTGGAATATGAGATTCCCATGATTTATGTA GCCGGTAATTTTGCTCCCTGGTTTCAGCTCGTTTACAGTGGTATCTTACTGGCAGAGATTTATACTACTGCGGTAGGTAA CCTTTATGGTTTTGTAGCCCGCCTTACCGATCCAGAAGGTAAGAAATACCGGACATACATTATTTTAACCGGGGTTGCTG CATTTATAACCAGTCAGCTTGGTTTTTCCAACCTGGTACGCTACCTCTACCCGGCAGTAGGTTATGCTGGTTTACTCCTG CTGGGAGGTTTAACACTGGGGATGTACCGGCGGGTCCGGAACAGATAA
Upstream 100 bases:
>100_bases AAGGTAATGAAATAAAGGGAGTAGATGTAAAGACAAATGATGGAGAGACCACGGGGGGAGGTTTACTACCTTTCAGATTG CGGCAACCTATATCGGGACA
Downstream 100 bases:
>100_bases GTTTGGTGGGAAAATAATCAAAATTTTATAGTTTAAACTTTTTTTATCAAAAAAATATCTTACTATCAAAAATATTTTAC TATACAAATAATATAGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYAGGRWLSKVIDGVITFFLFGA LTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIGGVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQAL PGRAPVPHWALSSVVYASYNIVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQLGFSNLVRYLYPAVGYAGLLL LGGLTLGMYRRVRNR
Sequences:
>Translated_335_residues MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYAGGRWLSKVIDGVITFFLFGA LTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIGGVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQAL PGRAPVPHWALSSVVYASYNIVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQLGFSNLVRYLYPAVGYAGLLL LGGLTLGMYRRVRNR >Mature_335_residues MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYAGGRWLSKVIDGVITFFLFGA LTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIGGVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQAL PGRAPVPHWALSSVVYASYNIVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQLGFSNLVRYLYPAVGYAGLLL LGGLTLGMYRRVRNR
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35899; Mature: 35899
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYA CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGRWLSKVIDGVITFFLFGALTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQALPGRAPVPHWALSSVVYASYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH IVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCEEEE AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQL ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHC GFSNLVRYLYPAVGYAGLLLLGGLTLGMYRRVRNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYA CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGRWLSKVIDGVITFFLFGALTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQALPGRAPVPHWALSSVVYASYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH IVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCEEEE AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQL ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHC GFSNLVRYLYPAVGYAGLLLLGGLTLGMYRRVRNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]