| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931063
Identifier: 220931063
GI number: 220931063
Start: 222657
End: 224045
Strand: Direct
Name: 220931063
Synonym: Hore_02150
Alternate gene names: NA
Gene position: 222657-224045 (Clockwise)
Preceding gene: 220931062
Following gene: 220931064
Centisome position: 8.64
GC content: 41.61
Gene sequence:
>1389_bases ATGGCCAGCAAAGAATATGATGTAATCATTGTAGGAGCCGGGCCAACCGGCATTTTTACTGCATTGGAGTTAATTAATAA GGAATCTGATCTTAAGGTAGTAATACTGGAAAAAGGGAATAATTTAAAAGATAGAGAATGTCCGATGAATGTCAAAAATA CTAACTGTGTTAAGTGTAAGAGTTGTTCAATAGTTTCCGGCTGGGGAGGAGCCGGGGCTTTCAGTGATGGGAAATTATCA CTGTCACCGGATATCGGTGGTCATTTAGATGAATATATAGGCAAAGAGAATTTGTCTGAACTTATTAAGTATGCTGATAA ACTTTATTTGAAATTTGGAGCTCCTGACCGTATTTTTGGAGTTGATAGCGATAAAGTTCAGGATATTAAGGAAAAAGCGG TTAAAGCTAACTTAAAATTTATACCCGCCAGGTTAAGGCATTTAGGCACCGGTTATAGTAAGACTGTCCTCCAGGCCATG CAGGACTTTATAGCTGAAAAAGGAGTAGATATCAGGTTCGGGGTTAATGTAAAAGAATTACTGGTGGAGGATGCGACAAT AAAGGGAGTTAAAACTAAAGAAGGGGAAATTATTTATGGTGATTATGTAGTAACAGCTCCAGGTCGGGAAAATGCTGAAT GGTTAACCCTGGAAGCAGAAAGGCTGGGGATTGAGACCACTATCAACCCTGTTGATATCGGCGTCAGGGTTGAGTGTCCG GCTGTAATTACCAAAGAGCTAACAGACAATATATATGAATCAAAGTTAATTTACCAGACCCCGACTTTTGATGATAAAGT CAGGACCTTCTGTATGTCACCATATGGGCAGGTGGTTAATGAAAATAATCAGGGCCTTATCACCGTAAACGGGCATAGTC ATGCTGAAATTAAAACCGAGAACACCAATTTTGCCCTTCTGGTCAGTAAAACATTTACTGAACCCTTCCATGAACCCATT ACCTATGGTAAAAATATTGCTAAACTGGCCAATCTACTAGGTGGTGGGGTGTTGGTACAGAGGCTTGGTGACCTCCTCGA TGGACATCGATCAACCCCGGAAAGGATTGCCCGGGGAATCGTGGAACCAACCCTGAAGGAGGCTACACCGGGTGATTTAA GTCTGGTATTACCATACCGCCATCTTAAAGATATTATTGAAATGATTGAAGTCCTTGATAACCTGGCTCCGGGGCTGTAT TCGCGGGATACCTTACTATATGGGGTAGAGGTTAAATTCTATTCTTCACGCCTTGAGGTCAATGATGAGATGGAGACCAG AATTAACAATCTGTATGCCGGTGGAGATGGTGCCGGTATTACCCGGGGTTTAATGCAGGCTTCGGTTTCAGGTATTCTTA TTGCCAGGAGTATTCTTAATAAAGTATAA
Upstream 100 bases:
>100_bases ATATAAAGACCAGGCAGGATTTTTACCTTTTAACTTGAATATAAGAAAGGGTCTATAATTAATGGCCCTATAATATAGTT TCTGTGGAGGGATATTAAAA
Downstream 100 bases:
>100_bases AAGTATAATAGATAACCGGGCCGGGCTTATATGTATACGGATTTTGAGCCAGAGGCCTGGTTTTTATTTTTAACACAATT TTTTTAAGGTATTATAAGTT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MASKEYDVIIVGAGPTGIFTALELINKESDLKVVILEKGNNLKDRECPMNVKNTNCVKCKSCSIVSGWGGAGAFSDGKLS LSPDIGGHLDEYIGKENLSELIKYADKLYLKFGAPDRIFGVDSDKVQDIKEKAVKANLKFIPARLRHLGTGYSKTVLQAM QDFIAEKGVDIRFGVNVKELLVEDATIKGVKTKEGEIIYGDYVVTAPGRENAEWLTLEAERLGIETTINPVDIGVRVECP AVITKELTDNIYESKLIYQTPTFDDKVRTFCMSPYGQVVNENNQGLITVNGHSHAEIKTENTNFALLVSKTFTEPFHEPI TYGKNIAKLANLLGGGVLVQRLGDLLDGHRSTPERIARGIVEPTLKEATPGDLSLVLPYRHLKDIIEMIEVLDNLAPGLY SRDTLLYGVEVKFYSSRLEVNDEMETRINNLYAGGDGAGITRGLMQASVSGILIARSILNKV
Sequences:
>Translated_462_residues MASKEYDVIIVGAGPTGIFTALELINKESDLKVVILEKGNNLKDRECPMNVKNTNCVKCKSCSIVSGWGGAGAFSDGKLS LSPDIGGHLDEYIGKENLSELIKYADKLYLKFGAPDRIFGVDSDKVQDIKEKAVKANLKFIPARLRHLGTGYSKTVLQAM QDFIAEKGVDIRFGVNVKELLVEDATIKGVKTKEGEIIYGDYVVTAPGRENAEWLTLEAERLGIETTINPVDIGVRVECP AVITKELTDNIYESKLIYQTPTFDDKVRTFCMSPYGQVVNENNQGLITVNGHSHAEIKTENTNFALLVSKTFTEPFHEPI TYGKNIAKLANLLGGGVLVQRLGDLLDGHRSTPERIARGIVEPTLKEATPGDLSLVLPYRHLKDIIEMIEVLDNLAPGLY SRDTLLYGVEVKFYSSRLEVNDEMETRINNLYAGGDGAGITRGLMQASVSGILIARSILNKV >Mature_461_residues ASKEYDVIIVGAGPTGIFTALELINKESDLKVVILEKGNNLKDRECPMNVKNTNCVKCKSCSIVSGWGGAGAFSDGKLSL SPDIGGHLDEYIGKENLSELIKYADKLYLKFGAPDRIFGVDSDKVQDIKEKAVKANLKFIPARLRHLGTGYSKTVLQAMQ DFIAEKGVDIRFGVNVKELLVEDATIKGVKTKEGEIIYGDYVVTAPGRENAEWLTLEAERLGIETTINPVDIGVRVECPA VITKELTDNIYESKLIYQTPTFDDKVRTFCMSPYGQVVNENNQGLITVNGHSHAEIKTENTNFALLVSKTFTEPFHEPIT YGKNIAKLANLLGGGVLVQRLGDLLDGHRSTPERIARGIVEPTLKEATPGDLSLVLPYRHLKDIIEMIEVLDNLAPGLYS RDTLLYGVEVKFYSSRLEVNDEMETRINNLYAGGDGAGITRGLMQASVSGILIARSILNKV
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 50714; Mature: 50583
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKEYDVIIVGAGPTGIFTALELINKESDLKVVILEKGNNLKDRECPMNVKNTNCVKCK CCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEC SCSIVSGWGGAGAFSDGKLSLSPDIGGHLDEYIGKENLSELIKYADKLYLKFGAPDRIFG CCCEEECCCCCCCCCCCCEEECCCCCCHHHHHHCHHHHHHHHHHHHHEEEEECCCCCEEC VDSDKVQDIKEKAVKANLKFIPARLRHLGTGYSKTVLQAMQDFIAEKGVDIRFGVNVKEL CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHH LVEDATIKGVKTKEGEIIYGDYVVTAPGRENAEWLTLEAERLGIETTINPVDIGVRVECP HHCCCCCCCEECCCCCEEECCEEEECCCCCCCCEEEEEHHHCCCEEECCEEEEEEEEECH AVITKELTDNIYESKLIYQTPTFDDKVRTFCMSPYGQVVNENNQGLITVNGHSHAEIKTE HHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCCCHHHHHCCCCCEEEEECCCCCEEEEEC NTNFALLVSKTFTEPFHEPITYGKNIAKLANLLGGGVLVQRLGDLLDGHRSTPERIARGI CCCEEEEEECHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHH VEPTLKEATPGDLSLVLPYRHLKDIIEMIEVLDNLAPGLYSRDTLLYGVEVKFYSSRLEV CCCHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC NDEMETRINNLYAGGDGAGITRGLMQASVSGILIARSILNKV CCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASKEYDVIIVGAGPTGIFTALELINKESDLKVVILEKGNNLKDRECPMNVKNTNCVKCK CCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEC SCSIVSGWGGAGAFSDGKLSLSPDIGGHLDEYIGKENLSELIKYADKLYLKFGAPDRIFG CCCEEECCCCCCCCCCCCEEECCCCCCHHHHHHCHHHHHHHHHHHHHEEEEECCCCCEEC VDSDKVQDIKEKAVKANLKFIPARLRHLGTGYSKTVLQAMQDFIAEKGVDIRFGVNVKEL CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHH LVEDATIKGVKTKEGEIIYGDYVVTAPGRENAEWLTLEAERLGIETTINPVDIGVRVECP HHCCCCCCCEECCCCCEEECCEEEECCCCCCCCEEEEEHHHCCCEEECCEEEEEEEEECH AVITKELTDNIYESKLIYQTPTFDDKVRTFCMSPYGQVVNENNQGLITVNGHSHAEIKTE HHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCCCHHHHHCCCCCEEEEECCCCCEEEEEC NTNFALLVSKTFTEPFHEPITYGKNIAKLANLLGGGVLVQRLGDLLDGHRSTPERIARGI CCCEEEEEECHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHH VEPTLKEATPGDLSLVLPYRHLKDIIEMIEVLDNLAPGLYSRDTLLYGVEVKFYSSRLEV CCCHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC NDEMETRINNLYAGGDGAGITRGLMQASVSGILIARSILNKV CCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]