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The map label for this gene is prsW [H]

Identifier: 220931062

GI number: 220931062

Start: 221898

End: 222515

Strand: Direct

Name: prsW [H]

Synonym: Hore_02140

Alternate gene names: 220931062

Gene position: 221898-222515 (Clockwise)

Preceding gene: 220931061

Following gene: 220931063

Centisome position: 8.61

GC content: 40.45

Gene sequence:

>618_bases
TTGTGGGTCTGGTATTTTTACCGCCAGGACAGATATGATCCGGAACCCCTCAGTTTAATCATCAGGGATTTTATCTGGGG
GATTTTAATTGTTATTCCCATTAGTATTATTGAATCACCATTCAGCCGGTTTTTAACCCCTGATACTCCCTTGCTTATTC
TCTTTTTTTCCTCGATTATATTTGTGGGTCTGGTTGAAGAAGGGGGGAAATCACTGGTTACCTACCGTCTCCATTACCGA
AACACTGAATTTGATGAGCCTGTTGATGGTATTATTTATGGTATTACAGTAGGACTGGGGTTTGCGGCAGCCGAAAATCT
TTTTTATACGATTATGTTTGGCTACCAGGTTGGACTTATCAGGGCGGTGGTTACCAGTCTGGCCCATGCTTCCTTTACCG
GTATATTTGGTTATTACCTTGGTCAGGCAAAAATAAAAGGGAACCAGGGGCTGATATTAAAGGGTTTTATTCTGGTAAGT
ATCCTCCATGGACTTTATGATTTTTTTGTCATAGGTCAGATAATGGGTTTTGTAACTACCGTCCTGGTAGTGGTGGCTCT
GCAAATATATCTGGCTTCTTTAATACGGTTAACAACAGAAAACTCTCCTTTTAAATAA

Upstream 100 bases:

>100_bases
ATTAACAATTTAATAAACGACCTATATCTATAAAATACAAAGGAGGTTATTTCCCATATATTTTATCAGTTTATTTGTCG
TTTCAATTCTGCCCGGTATT

Downstream 100 bases:

>100_bases
CCTCCACTCAGGTCAGATTCATTGTCGAAATCAATAAAAAAATATAAAGACCAGGCAGGATTTTTACCTTTTAACTTGAA
TATAAGAAAGGGTCTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Protease responsible for activating sigma-W [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MWVWYFYRQDRYDPEPLSLIIRDFIWGILIVIPISIIESPFSRFLTPDTPLLILFFSSIIFVGLVEEGGKSLVTYRLHYR
NTEFDEPVDGIIYGITVGLGFAAAENLFYTIMFGYQVGLIRAVVTSLAHASFTGIFGYYLGQAKIKGNQGLILKGFILVS
ILHGLYDFFVIGQIMGFVTTVLVVVALQIYLASLIRLTTENSPFK

Sequences:

>Translated_205_residues
MWVWYFYRQDRYDPEPLSLIIRDFIWGILIVIPISIIESPFSRFLTPDTPLLILFFSSIIFVGLVEEGGKSLVTYRLHYR
NTEFDEPVDGIIYGITVGLGFAAAENLFYTIMFGYQVGLIRAVVTSLAHASFTGIFGYYLGQAKIKGNQGLILKGFILVS
ILHGLYDFFVIGQIMGFVTTVLVVVALQIYLASLIRLTTENSPFK
>Mature_205_residues
MWVWYFYRQDRYDPEPLSLIIRDFIWGILIVIPISIIESPFSRFLTPDTPLLILFFSSIIFVGLVEEGGKSLVTYRLHYR
NTEFDEPVDGIIYGITVGLGFAAAENLFYTIMFGYQVGLIRAVVTSLAHASFTGIFGYYLGQAKIKGNQGLILKGFILVS
ILHGLYDFFVIGQIMGFVTTVLVVVALQIYLASLIRLTTENSPFK

Specific function: Is responsible for Site-1 cleavage of the RsiW anti- sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sig

COG id: COG2339

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protease prsW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23159; Mature: 23159

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVWYFYRQDRYDPEPLSLIIRDFIWGILIVIPISIIESPFSRFLTPDTPLLILFFSSII
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FVGLVEEGGKSLVTYRLHYRNTEFDEPVDGIIYGITVGLGFAAAENLFYTIMFGYQVGLI
HHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVVTSLAHASFTGIFGYYLGQAKIKGNQGLILKGFILVSILHGLYDFFVIGQIMGFVTT
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVVVALQIYLASLIRLTTENSPFK
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWVWYFYRQDRYDPEPLSLIIRDFIWGILIVIPISIIESPFSRFLTPDTPLLILFFSSII
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FVGLVEEGGKSLVTYRLHYRNTEFDEPVDGIIYGITVGLGFAAAENLFYTIMFGYQVGLI
HHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVVTSLAHASFTGIFGYYLGQAKIKGNQGLILKGFILVSILHGLYDFFVIGQIMGFVTT
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVVVALQIYLASLIRLTTENSPFK
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA