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The map label for this gene is 220931064

Identifier: 220931064

GI number: 220931064

Start: 224237

End: 224911

Strand: Direct

Name: 220931064

Synonym: Hore_02160

Alternate gene names: NA

Gene position: 224237-224911 (Clockwise)

Preceding gene: 220931063

Following gene: 220931065

Centisome position: 8.7

GC content: 39.56

Gene sequence:

>675_bases
ATGTCTGGGTGCCGGGGAGTATTCAGTAACATAACATGGAAAGCAGGTCTTAACGAAATCTATCACAGGCTTTATAAAAA
ATTCGGTCCCCAGCACTGGTGGCCCGCTGACTCCCGGTTTGAAGTTATTATCGGAGCAATTTTGACTCAGGCAGTTAGCT
GGCAAAATGTTGAAAAGGCTATAGAAAATTTAAAAAAACATAAGGTCTTATATCCTGAAGAATTGTTACATCTGGAAGAG
GAAATACTGGCGAAGATGATAAAACCGGCCGGTTATTATAATATGAAGGCCAGAAAAATTAAAGCCTTTATTAACTTTTT
GTTTGAGGACTACGGGGGAAGTCTTGATGAAATGTTTCAGGAACCCCTTTCAAAAATCAGGGATAAACTGCTTGAGGTTT
ACGGCATAGGGCCTGAAACCGCTGATTCTATATTATTGTATGCTGGGGAGTTTCCTGTTTTTGTAATTGATGCTTACACA
AAGCGTATTTTTAGCCGGATTGGTTATATAGAGGAAAACATAGGTTACCATACCTTGCAGAAAATGATTATGGACAACCT
GCCTGCCAGAACCGGGATATACAATGAATACCATGCTCTTTTAGTGGCCCTGGGAAAAGAAATATGTAAAAAGAATAACC
CCCTGTGTGAAAAATGTCCCCTTAACAGGAAATAA

Upstream 100 bases:

>100_bases
TTATAAGTTGATAAAAATGGATAGAGCCCGGCTAATGTTATAGCATTTGCCTTATAAATGTATAGTTAGACATGGATAGA
AATGAAAGGGGAAATAACTC

Downstream 100 bases:

>100_bases
AATATATAATATTTTGACAATATAATATTTTTTTGGTTAATTATAAAATAATTTATAGAAATATATTGTATTTTTTAGTA
AAATATGATATCATGGTTTA

Product: HhH-GPD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSGCRGVFSNITWKAGLNEIYHRLYKKFGPQHWWPADSRFEVIIGAILTQAVSWQNVEKAIENLKKHKVLYPEELLHLEE
EILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQEPLSKIRDKLLEVYGIGPETADSILLYAGEFPVFVIDAYT
KRIFSRIGYIEENIGYHTLQKMIMDNLPARTGIYNEYHALLVALGKEICKKNNPLCEKCPLNRK

Sequences:

>Translated_224_residues
MSGCRGVFSNITWKAGLNEIYHRLYKKFGPQHWWPADSRFEVIIGAILTQAVSWQNVEKAIENLKKHKVLYPEELLHLEE
EILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQEPLSKIRDKLLEVYGIGPETADSILLYAGEFPVFVIDAYT
KRIFSRIGYIEENIGYHTLQKMIMDNLPARTGIYNEYHALLVALGKEICKKNNPLCEKCPLNRK
>Mature_223_residues
SGCRGVFSNITWKAGLNEIYHRLYKKFGPQHWWPADSRFEVIIGAILTQAVSWQNVEKAIENLKKHKVLYPEELLHLEEE
ILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQEPLSKIRDKLLEVYGIGPETADSILLYAGEFPVFVIDAYTK
RIFSRIGYIEENIGYHTLQKMIMDNLPARTGIYNEYHALLVALGKEICKKNNPLCEKCPLNRK

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: NA

Molecular weight: Translated: 25942; Mature: 25810

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGCRGVFSNITWKAGLNEIYHRLYKKFGPQHWWPADSRFEVIIGAILTQAVSWQNVEKA
CCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IENLKKHKVLYPEELLHLEEEILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
EPLSKIRDKLLEVYGIGPETADSILLYAGEFPVFVIDAYTKRIFSRIGYIEENIGYHTLQ
HHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHH
KMIMDNLPARTGIYNEYHALLVALGKEICKKNNPLCEKCPLNRK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
SGCRGVFSNITWKAGLNEIYHRLYKKFGPQHWWPADSRFEVIIGAILTQAVSWQNVEKA
CCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IENLKKHKVLYPEELLHLEEEILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
EPLSKIRDKLLEVYGIGPETADSILLYAGEFPVFVIDAYTKRIFSRIGYIEENIGYHTLQ
HHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHH
KMIMDNLPARTGIYNEYHALLVALGKEICKKNNPLCEKCPLNRK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]