| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220930863
Identifier: 220930863
GI number: 220930863
Start: 15393
End: 15677
Strand: Reverse
Name: 220930863
Synonym: Hore_00130
Alternate gene names: NA
Gene position: 15677-15393 (Counterclockwise)
Preceding gene: 220930864
Following gene: 220930859
Centisome position: 0.61
GC content: 38.95
Gene sequence:
>285_bases TTGACTAGTTTTTTAAAAAATAATGAGAATCCCCTTAAATATGTAAATATAATCCCTGCAGGTAAATCTCATATCCATAT AAGGAATAAAAAGGTCTGTCTTGACTGTGAAAATAAACCCTGTACGTACTACTGCCCTGCCCGTGTATTTTTCTGGGAAG TTAATGAAATTAAAATATTGTTTGAAAGGTGTATCGAATGTGGAGCCTGCCCCTGGGGGTGTCCCCGGGAAAACATAGAC TGGGTCTACCCACCAGGAGGCTATGGTGTCAAATATGAGGTTTAA
Upstream 100 bases:
>100_bases AGCTGAATGAAATAATAGAAGAAGTTAAAGAAATTCAATCACTCCAAAAAAATATCAGAGATATATATTCTGGATTACAG CACTGGAGGGTATTTTAAAA
Downstream 100 bases:
>100_bases ATAATTTTTGTGACAGGTTTATTATTAATTATTAATGGTAAGCGACAAAACAATTTATGATGGTTAACATATTTAAAATA TTTATTCAAAAAGGAGGATA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: Ferredoxin; Ferredoxin-Like Protein; FixX-Like Protein
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTSFLKNNENPLKYVNIIPAGKSHIHIRNKKVCLDCENKPCTYYCPARVFFWEVNEIKILFERCIECGACPWGCPRENID WVYPPGGYGVKYEV
Sequences:
>Translated_94_residues MTSFLKNNENPLKYVNIIPAGKSHIHIRNKKVCLDCENKPCTYYCPARVFFWEVNEIKILFERCIECGACPWGCPRENID WVYPPGGYGVKYEV >Mature_93_residues TSFLKNNENPLKYVNIIPAGKSHIHIRNKKVCLDCENKPCTYYCPARVFFWEVNEIKILFERCIECGACPWGCPRENIDW VYPPGGYGVKYEV
Specific function: Unknown
COG id: COG2440
COG function: function code C; Ferredoxin-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10962; Mature: 10831
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 8.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFLKNNENPLKYVNIIPAGKSHIHIRNKKVCLDCENKPCTYYCPARVFFWEVNEIKIL CCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEEECCCCCEEEECCCEEEEEECCHHHHH FERCIECGACPWGCPRENIDWVYPPGGYGVKYEV HHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEC >Mature Secondary Structure TSFLKNNENPLKYVNIIPAGKSHIHIRNKKVCLDCENKPCTYYCPARVFFWEVNEIKIL CCCCCCCCCCEEEEEEEECCCCEEEEECCEEEEECCCCCEEEECCCEEEEEECCHHHHH FERCIECGACPWGCPRENIDWVYPPGGYGVKYEV HHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA