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The map label for this gene is ybgF [C]

Identifier: 220918573

GI number: 220918573

Start: 3887581

End: 3888426

Strand: Reverse

Name: ybgF [C]

Synonym: A2cp1_3481

Alternate gene names: 220918573

Gene position: 3888426-3887581 (Counterclockwise)

Preceding gene: 220918574

Following gene: 220918572

Centisome position: 77.32

GC content: 72.7

Gene sequence:

>846_bases
GTGAGCCTCCGCACCTCCATCCTCCGGGCCGCCGCGCCGGCGCTCGCGCTCCTGCTGACCGCATGCTGGGTCCCGCTGGA
GCGCGGGCGTCAGATGGAGGCGCGCCTCGACCGGCTCGAGGCGGACTCCGCCGAGCAGCAGCGGGTCGTCGCCGATCGCG
TCGCCGCGGTCGATCGCAAGATCGTCGAGGTGCAGCAGAAGATCGACGAGCTGAACCGCGCCGCCCGGCGGAGCGGCGCC
GATCTCGGGGTCTCCCTCCAGCGCCTGCAGGACGAGTTCACGCGCGTGAAGGGCGACCTCGAGGTCGAGCAGCACCGCCT
CGGGCAGATCGAGAAGTCCGTCGGCGCCCTCTCCGATCGCACCGACAAGCGCTTCGCGGCCCTCCGCGGGCGCGGCGCGC
TCGACGAGCTCGAGGCGAAGGAGCGGATCGACACGCTCGAGCGGCCGGACGACAAGGTCTCCTTCCTGGCGCTCGCGCAG
AAGGAGGAGGCGACCGGCGACAAGAGCGTCGCGCGGACGCTGTACGACGAGTACGTGCGCCGCTGGCCGGCGGACGCCAT
GGCGCCCGAGGCCGCCTTCCACTCCGCCGAGCGCTCGATGGAGCAGAAGCGCTGGCGCGAGGCGCTGGTCGCGTACGGCT
GGATCTACGAGAAGGCGCCGCGCTCCGAGCGCGCGCCCGACGCGATGCTGGGCATCGCCCGGGCCATGCTCGAGGTGGAC
GAGCTGAAGAAGGACGCCCCGGGCGTGCTGAAGGAGCTCGTGGCGAAGTTCCCCAGGTCGGACGCGGCCGCGCAGGCCAG
GAAGCTCCAGGCCGACCTCACCCCGAAGAAGCCGCGCCGGAAGTAG

Upstream 100 bases:

>100_bases
CCGTCGACACGGTCAGCTACGGCGAGGAGAAGCCGGTCTGCTCCGAGGCGACCGAGGCCTGCTGGTCCAAGAACCGCCGC
GACGACTTCCAGATCGAGCG

Downstream 100 bases:

>100_bases
GCGCGTTCCTCTCACATCCCCCTGAGGTAGGTGGTACACTCCGTCCCGTTCGGAGTGTGTGTTCCACCGTCCGTGGAGGG
TGTGCGATGGCGAGGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; L-Pal System Protein Ybgf; L-Pal System YbgF

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSLRTSILRAAAPALALLLTACWVPLERGRQMEARLDRLEADSAEQQRVVADRVAAVDRKIVEVQQKIDELNRAARRSGA
DLGVSLQRLQDEFTRVKGDLEVEQHRLGQIEKSVGALSDRTDKRFAALRGRGALDELEAKERIDTLERPDDKVSFLALAQ
KEEATGDKSVARTLYDEYVRRWPADAMAPEAAFHSAERSMEQKRWREALVAYGWIYEKAPRSERAPDAMLGIARAMLEVD
ELKKDAPGVLKELVAKFPRSDAAAQARKLQADLTPKKPRRK

Sequences:

>Translated_281_residues
MSLRTSILRAAAPALALLLTACWVPLERGRQMEARLDRLEADSAEQQRVVADRVAAVDRKIVEVQQKIDELNRAARRSGA
DLGVSLQRLQDEFTRVKGDLEVEQHRLGQIEKSVGALSDRTDKRFAALRGRGALDELEAKERIDTLERPDDKVSFLALAQ
KEEATGDKSVARTLYDEYVRRWPADAMAPEAAFHSAERSMEQKRWREALVAYGWIYEKAPRSERAPDAMLGIARAMLEVD
ELKKDAPGVLKELVAKFPRSDAAAQARKLQADLTPKKPRRK
>Mature_280_residues
SLRTSILRAAAPALALLLTACWVPLERGRQMEARLDRLEADSAEQQRVVADRVAAVDRKIVEVQQKIDELNRAARRSGAD
LGVSLQRLQDEFTRVKGDLEVEQHRLGQIEKSVGALSDRTDKRFAALRGRGALDELEAKERIDTLERPDDKVSFLALAQK
EEATGDKSVARTLYDEYVRRWPADAMAPEAAFHSAERSMEQKRWREALVAYGWIYEKAPRSERAPDAMLGIARAMLEVDE
LKKDAPGVLKELVAKFPRSDAAAQARKLQADLTPKKPRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31636; Mature: 31505

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRTSILRAAAPALALLLTACWVPLERGRQMEARLDRLEADSAEQQRVVADRVAAVDRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IVEVQQKIDELNRAARRSGADLGVSLQRLQDEFTRVKGDLEVEQHRLGQIEKSVGALSDR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TDKRFAALRGRGALDELEAKERIDTLERPDDKVSFLALAQKEEATGDKSVARTLYDEYVR
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RWPADAMAPEAAFHSAERSMEQKRWREALVAYGWIYEKAPRSERAPDAMLGIARAMLEVD
HCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ELKKDAPGVLKELVAKFPRSDAAAQARKLQADLTPKKPRRK
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLRTSILRAAAPALALLLTACWVPLERGRQMEARLDRLEADSAEQQRVVADRVAAVDRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IVEVQQKIDELNRAARRSGADLGVSLQRLQDEFTRVKGDLEVEQHRLGQIEKSVGALSDR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TDKRFAALRGRGALDELEAKERIDTLERPDDKVSFLALAQKEEATGDKSVARTLYDEYVR
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RWPADAMAPEAAFHSAERSMEQKRWREALVAYGWIYEKAPRSERAPDAMLGIARAMLEVD
HCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ELKKDAPGVLKELVAKFPRSDAAAQARKLQADLTPKKPRRK
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA