| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918572
Identifier: 220918572
GI number: 220918572
Start: 3886949
End: 3887494
Strand: Reverse
Name: 220918572
Synonym: A2cp1_3480
Alternate gene names: NA
Gene position: 3887494-3886949 (Counterclockwise)
Preceding gene: 220918573
Following gene: 220918569
Centisome position: 77.3
GC content: 75.46
Gene sequence:
>546_bases ATGGCGAGGATGCGGATCGGCGAGCTGCTCGTGGCGCAGGGCGCCATCGACGCGGTCCAGCTCGAGAGCGCGCTCGCGCA CCAGCGCCGCTGGGGCGGGCGCCTCGGCCGCAGCATCGTCAGCCTCGGGTTCCTGGGCGAGCCGGTCGTGCTCGGCGCGG TGGGCGCGCAGCTCGGGGTGCCGTTCATGGAGATCGGCGACCGGCACGTGCCGCCGGCGGTCCTTCGCCTGCTGCCCGAG AAGCTCATCCGCACCCGCAACGTGCTGCCGCTCTCGCGCGTGAACGAGCCCCGCGGCGCGGCGGTGGTGGTCGCGCTGGC GGACCCGGGGGACCTCGGCGTCCTCGACGAGATCGCGTTCGCGACCGGCCTGCGGGTCAAGCCGGTGCTGGCCGCCGACG ACGACCTCACCCGGGCCATCGCGCGGCTGCTGGACGGCGCGACGTTCCGGCCCGGCGGCTTCGCCTACCGCCCGGACGCG GTGGACCTGCCCGAGGACACGAGCCCGCTGACGCTGCTGCGTCGGGGCGACGGCTGGATGCATTAG
Upstream 100 bases:
>100_bases CGCGCCGGAAGTAGGCGCGTTCCTCTCACATCCCCCTGAGGTAGGTGGTACACTCCGTCCCGTTCGGAGTGTGTGTTCCA CCGTCCGTGGAGGGTGTGCG
Downstream 100 bases:
>100_bases CCGACGAGGGCTGCGCCCCCGCGTCAGGCCACCTCGGCCTCGTCGTCGGGCTCGGGATCCGGCGCCTCGCCCGGCGGCCG ACCCTCGTCGTGCAGGCCCC
Product: General secretory system II protein E domain-containing protein
Products: NA
Alternate protein names: General Secretion Pathway Protein E; Type IV-A Pilus Assembly ATPase PilB; MSHA Biogenesis Protein MshE; Type IV Pilus Assembly Protein PilB; General Secretory System II Protein E Domain Protein; General Secretory System II Protein E; GspIIEN Domain-Containing Protein; Pili Biogenesis Protein PilB-Like ATPase; Mannose-Sensitive Agglutinin; Type IV Pilus Biogenesis Protein PilB; Type Iv-A Pilus Assembly ATPase Pilb; General Secretory System II Protein E-Like; Type IV Pilin; Pilus Assembly Pathway ATPase PilB; Tfp Pilus Assembly Protein PilB; General Secretory System II Protein E-Like Protein; MshA Biogenesis Protein MshE; ATPase; Type II Secretory Pathway ATPase; Type IV Pilus Biogenesis ATPase PilB
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MARMRIGELLVAQGAIDAVQLESALAHQRRWGGRLGRSIVSLGFLGEPVVLGAVGAQLGVPFMEIGDRHVPPAVLRLLPE KLIRTRNVLPLSRVNEPRGAAVVVALADPGDLGVLDEIAFATGLRVKPVLAADDDLTRAIARLLDGATFRPGGFAYRPDA VDLPEDTSPLTLLRRGDGWMH
Sequences:
>Translated_181_residues MARMRIGELLVAQGAIDAVQLESALAHQRRWGGRLGRSIVSLGFLGEPVVLGAVGAQLGVPFMEIGDRHVPPAVLRLLPE KLIRTRNVLPLSRVNEPRGAAVVVALADPGDLGVLDEIAFATGLRVKPVLAADDDLTRAIARLLDGATFRPGGFAYRPDA VDLPEDTSPLTLLRRGDGWMH >Mature_180_residues ARMRIGELLVAQGAIDAVQLESALAHQRRWGGRLGRSIVSLGFLGEPVVLGAVGAQLGVPFMEIGDRHVPPAVLRLLPEK LIRTRNVLPLSRVNEPRGAAVVVALADPGDLGVLDEIAFATGLRVKPVLAADDDLTRAIARLLDGATFRPGGFAYRPDAV DLPEDTSPLTLLRRGDGWMH
Specific function: Unknown
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19361; Mature: 19230
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMRIGELLVAQGAIDAVQLESALAHQRRWGGRLGRSIVSLGFLGEPVVLGAVGAQLGV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PFMEIGDRHVPPAVLRLLPEKLIRTRNVLPLSRVNEPRGAAVVVALADPGDLGVLDEIAF CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCHHHHHHH ATGLRVKPVLAADDDLTRAIARLLDGATFRPGGFAYRPDAVDLPEDTSPLTLLRRGDGWM HCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCC H C >Mature Secondary Structure ARMRIGELLVAQGAIDAVQLESALAHQRRWGGRLGRSIVSLGFLGEPVVLGAVGAQLGV CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PFMEIGDRHVPPAVLRLLPEKLIRTRNVLPLSRVNEPRGAAVVVALADPGDLGVLDEIAF CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCHHHHHHH ATGLRVKPVLAADDDLTRAIARLLDGATFRPGGFAYRPDAVDLPEDTSPLTLLRRGDGWM HCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA