| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917411
Identifier: 220917411
GI number: 220917411
Start: 2560493
End: 2561074
Strand: Reverse
Name: 220917411
Synonym: A2cp1_2311
Alternate gene names: NA
Gene position: 2561074-2560493 (Counterclockwise)
Preceding gene: 220917412
Following gene: 220917410
Centisome position: 50.92
GC content: 77.15
Gene sequence:
>582_bases ATGACGCTCCGCACCCTGGTCCCGATCCTCGCGCTCGCGCTCGCCTGCGCGCGCGCCCCGGCGCCGGCCGCGCCCCGCGC CGCCGCGCCGGCCGAGTACTTCCCGCTCGCGGTCGGGAACAGCTGGACGTACGTGGACGAGTCGCCGGCGCTGCCGCCCG AGCGCCGCGGCGCCCTCCGCACCGTGCGGATCCTGGAGCGGACCGCCGACGGCTACTTCCGCGACAGCGATCGCGGCGAG CTGCGCGCGGACGGCGCCTGCGTGCACGACCGGCTGCGCCGGCTGCTCTGCGCGCCGCTGGCGCAGGGCCAGCAGTGGAC CTCGGTCGTCTCGGCCAGCTCCACCGAGCGCTACGAGATCGCCGCCGTGGGCGAGACGGCGGAGACGCCGGCGGGCCGCT TCGAGGGCTGCGTGCGCGTGCGGGCGCACAACCGGGCCGGGCCGACCACCGACAACGTCCTCGAGATCACCTACGCGCCG GGCGTCGGGCCGGTGCGGATCGAGACGTGGGCGGTGGTGGAGGGGAACGTGGCGCCGCAGGTGCGGGCGGTGCTCGGCTC GTACCGGGTCGGAGGCAAGTGA
Upstream 100 bases:
>100_bases GAGCTGCGCGCCCGCGACGCCGAGGCCGGCCGCGTGGCCGGCAAGTAGGCGCGGCCGCGGGGGCCACCTCGCGCCGGCTT TCCGCTAAGATGCGACCCTC
Downstream 100 bases:
>100_bases TGCGCGAGGTCGGGATCGGGATCGCCGGGTTCGGCGTGGTCGGCGGCGGGGTGCTGTCCATCCTGCGGCAGCACGCTGGG GACATCGAGGCGCGGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTLRTLVPILALALACARAPAPAAPRAAAPAEYFPLAVGNSWTYVDESPALPPERRGALRTVRILERTADGYFRDSDRGE LRADGACVHDRLRRLLCAPLAQGQQWTSVVSASSTERYEIAAVGETAETPAGRFEGCVRVRAHNRAGPTTDNVLEITYAP GVGPVRIETWAVVEGNVAPQVRAVLGSYRVGGK
Sequences:
>Translated_193_residues MTLRTLVPILALALACARAPAPAAPRAAAPAEYFPLAVGNSWTYVDESPALPPERRGALRTVRILERTADGYFRDSDRGE LRADGACVHDRLRRLLCAPLAQGQQWTSVVSASSTERYEIAAVGETAETPAGRFEGCVRVRAHNRAGPTTDNVLEITYAP GVGPVRIETWAVVEGNVAPQVRAVLGSYRVGGK >Mature_192_residues TLRTLVPILALALACARAPAPAAPRAAAPAEYFPLAVGNSWTYVDESPALPPERRGALRTVRILERTADGYFRDSDRGEL RADGACVHDRLRRLLCAPLAQGQQWTSVVSASSTERYEIAAVGETAETPAGRFEGCVRVRAHNRAGPTTDNVLEITYAPG VGPVRIETWAVVEGNVAPQVRAVLGSYRVGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20677; Mature: 20545
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRTLVPILALALACARAPAPAAPRAAAPAEYFPLAVGNSWTYVDESPALPPERRGALR CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHH TVRILERTADGYFRDSDRGELRADGACVHDRLRRLLCAPLAQGQQWTSVVSASSTERYEI HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEE AAVGETAETPAGRFEGCVRVRAHNRAGPTTDNVLEITYAPGVGPVRIETWAVVEGNVAPQ EEECCCCCCCCCHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCHH VRAVLGSYRVGGK HHHHHHHHCCCCC >Mature Secondary Structure TLRTLVPILALALACARAPAPAAPRAAAPAEYFPLAVGNSWTYVDESPALPPERRGALR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHH TVRILERTADGYFRDSDRGELRADGACVHDRLRRLLCAPLAQGQQWTSVVSASSTERYEI HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEE AAVGETAETPAGRFEGCVRVRAHNRAGPTTDNVLEITYAPGVGPVRIETWAVVEGNVAPQ EEECCCCCCCCCHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCHH VRAVLGSYRVGGK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA