| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917412
Identifier: 220917412
GI number: 220917412
Start: 2561127
End: 2561987
Strand: Reverse
Name: 220917412
Synonym: A2cp1_2312
Alternate gene names: NA
Gene position: 2561987-2561127 (Counterclockwise)
Preceding gene: 220917413
Following gene: 220917411
Centisome position: 50.94
GC content: 81.53
Gene sequence:
>861_bases GTGGGGATCGCGGCGGGCGCGCTCCTCCTCGCCTCGGCCTGCCGGCCGGGGACACCGCCGGTGCACGTGGTGTCGATCCG CGCCGAGCCCGGGGCGCTGGCCGGACCGCTCGTGGAGGCCGGCCTGGACGCCGCCGCCCTCGAGTCCGCCGCGCGCGACG CGCTCGCCGGCGCCGGGTTTCGCCTCGGCGAGGGGAAGCGCCCGCACCAGGCGCGCGTGGACGTGGTGGGCATCCGGTTC GTGCCCGGCCCGCCCGGCGGCGTGGCGCGGGTGGAGACCGCGGTGCTGCTGGAGCTCGTCCCGGCCGACGGGGTCGACGG CACCGCCGTGCGCGAGACCGCCGCCGGCGCCGCCACGCTCGCGGCCGGTCCCGCCGAGGCGTGGCGGTCCGCGCTGGCCC TCGGGGCGCGCGGCGCGGCCGAGGCGCTCGCGCTGGCGACGGCGGAGGACGCGAAGCCCACCGGCGCCGTGGTGCGCGAT CTCGGCGCCGACGACGCGCGGGTGCGGCGGCACGCCGTGCGGGTGGCCGGCGAGCGGCGCGCCCGCGAGGCGGTGCCGGC GCTCGTGGAGCGGCTGCGCGATCCGGAGCCGGAGGTGGCGCACCTCGCGGTGGGCGCGCTCGGCCAGATCCGCGACCCGC GGGCGGTGGGACCGCTCATCGACCTCTCGCAGCGCGGCGACGGCGGCATGGCGCTGGCGCTGGTGCGCATCATCGGCGAC ATCGGCGGGCCCGAGGCGAAGGGGTACCTGCTCACGCTCGAGGCCGGCCACCCCGAGCCGCGGGTCCGCGCCGCGGCGCG CGACGCGCTCGCCGAGCTGCGCGCCCGCGACGCCGAGGCCGGCCGCGTGGCCGGCAAGTAG
Upstream 100 bases:
>100_bases CGCGCTCCCGAGCCGCCGCCGCCGGAGCCCGGGCGCGGCGATCCCGAGGCCTGACGCACGGCCGAACGCGATGCCCGGAC CGGCGCGATGGCGGAGGGGG
Downstream 100 bases:
>100_bases GCGCGGCCGCGGGGGCCACCTCGCGCCGGCTTTCCGCTAAGATGCGACCCTCATGACGCTCCGCACCCTGGTCCCGATCC TCGCGCTCGCGCTCGCCTGC
Product: PBS lyase HEAT domain-containing protein repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGIAAGALLLASACRPGTPPVHVVSIRAEPGALAGPLVEAGLDAAALESAARDALAGAGFRLGEGKRPHQARVDVVGIRF VPGPPGGVARVETAVLLELVPADGVDGTAVRETAAGAATLAAGPAEAWRSALALGARGAAEALALATAEDAKPTGAVVRD LGADDARVRRHAVRVAGERRAREAVPALVERLRDPEPEVAHLAVGALGQIRDPRAVGPLIDLSQRGDGGMALALVRIIGD IGGPEAKGYLLTLEAGHPEPRVRAAARDALAELRARDAEAGRVAGK
Sequences:
>Translated_286_residues MGIAAGALLLASACRPGTPPVHVVSIRAEPGALAGPLVEAGLDAAALESAARDALAGAGFRLGEGKRPHQARVDVVGIRF VPGPPGGVARVETAVLLELVPADGVDGTAVRETAAGAATLAAGPAEAWRSALALGARGAAEALALATAEDAKPTGAVVRD LGADDARVRRHAVRVAGERRAREAVPALVERLRDPEPEVAHLAVGALGQIRDPRAVGPLIDLSQRGDGGMALALVRIIGD IGGPEAKGYLLTLEAGHPEPRVRAAARDALAELRARDAEAGRVAGK >Mature_285_residues GIAAGALLLASACRPGTPPVHVVSIRAEPGALAGPLVEAGLDAAALESAARDALAGAGFRLGEGKRPHQARVDVVGIRFV PGPPGGVARVETAVLLELVPADGVDGTAVRETAAGAATLAAGPAEAWRSALALGARGAAEALALATAEDAKPTGAVVRDL GADDARVRRHAVRVAGERRAREAVPALVERLRDPEPEVAHLAVGALGQIRDPRAVGPLIDLSQRGDGGMALALVRIIGDI GGPEAKGYLLTLEAGHPEPRVRAAARDALAELRARDAEAGRVAGK
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28826; Mature: 28695
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAAGALLLASACRPGTPPVHVVSIRAEPGALAGPLVEAGLDAAALESAARDALAGAGF CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCC RLGEGKRPHQARVDVVGIRFVPGPPGGVARVETAVLLELVPADGVDGTAVRETAAGAATL CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHCCCHHH AAGPAEAWRSALALGARGAAEALALATAEDAKPTGAVVRDLGADDARVRRHAVRVAGERR CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH AREAVPALVERLRDPEPEVAHLAVGALGQIRDPRAVGPLIDLSQRGDGGMALALVRIIGD HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCHHHHHHHHHHHH IGGPEAKGYLLTLEAGHPEPRVRAAARDALAELRARDAEAGRVAGK CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GIAAGALLLASACRPGTPPVHVVSIRAEPGALAGPLVEAGLDAAALESAARDALAGAGF CCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCC RLGEGKRPHQARVDVVGIRFVPGPPGGVARVETAVLLELVPADGVDGTAVRETAAGAATL CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHCCCHHH AAGPAEAWRSALALGARGAAEALALATAEDAKPTGAVVRDLGADDARVRRHAVRVAGERR CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH AREAVPALVERLRDPEPEVAHLAVGALGQIRDPRAVGPLIDLSQRGDGGMALALVRIIGD HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCHHHHHHHHHHHH IGGPEAKGYLLTLEAGHPEPRVRAAARDALAELRARDAEAGRVAGK CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA