| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yfgL [H]
Identifier: 220917390
GI number: 220917390
Start: 2539427
End: 2540518
Strand: Reverse
Name: yfgL [H]
Synonym: A2cp1_2290
Alternate gene names: 220917390
Gene position: 2540518-2539427 (Counterclockwise)
Preceding gene: 220917391
Following gene: 220917389
Centisome position: 50.51
GC content: 77.56
Gene sequence:
>1092_bases GTGACGGCGCTCGCGCTGGCGCTCGCGCTGGCGGCGGCGCCGGGCGTGTCGTCGCGCCTGCCGGCCGGCCCGCTGGACCT GTACCGCATCGCCTGGATGCGCCCGGTGGTCGGGCCGCAGGCGATGGAGTCGCGCCCGCTCGAGCCGGGCGGCGTGGCGG TGGACCCGGAGACCGGGTACGCCGTGTTCGGCACGCGCGACGGCTGGGTCCACGCGCTCCGGCCGGACGGCTCGGTGGCC TGGGAGCTCCGCACCGCGGGGAGCTTCTGGGCGCCGCCGGCCATCGACCACGGCGTCGCCTACGTCGGGTGCACCGACGG GCGGCTCTACGCGCTGGCGACGGCCACCGGCAAGGAGCTGTGGCGCTACGACGCGAAGGAGGAGCTGGGCACGCGCCCTG CCGTCGCGGACGGCACCGTCTTCGTGATGAGCCTGCAGGACACGCTGTTCGCGGTGGACGCGAAGACCGGCGCCTGGAAG TGGCACCACCGGCGCGAGGCGCGCGCCGGGTTCACGGTCCGTGGCGCCGCCTGGCCGGTCGCCCGCGGCGGCACGGTGTG GGCCGGCTACTCCGACGGATGGGTCGCGGCGCTCGACGTGGCGAACGGCGCGACGCGGTGGGAGCGTACCGTGGCCCCCG CCGGCGACTACCTCGACGTGGACGCGATCCAGCTCGACGGGAAGCACCTGTACGCGACCGCGTTCTCCGGCGCGGTGCTG GCGATGGACGCGGCCACCGGCGATCCGGTCTGGGCCTTCCGCGCCCCCGGCGCGGCGCGGCTCGTGCTCGGGCGCGGGGC CGTGATCGCGGTCACCTCCAGCTCGGTCCACGCGCTCGATCCGGCCGCCGGCCACGTCCTCTGGACGGCGCCGCTGGGCG GCGCGCCCGGCGGCGGCGCGCCGGTGATCGCCGGGCCGTGGGTGCTCGTGCCCGCCGGCCAGGGCGGGCTCCGGTTCCTG GAGGCGTCGAGCGGGCGCACGCTGCGCGTGCTCGACCCCGGCACCGGCATCTCCTCCACGCCGGGCGTCGGCGGCGAGCG CGTGTACGTGCTCTCCAACGGCGGCGACCTGCTCGCGCTCGACCTGCGGTGA
Upstream 100 bases:
>100_bases CCGAGGCCAGGGCGCTGCTGGCCGGCTTCGCCGAGAAGCACAAGGACTCGCTGCTCACGCCCGAGGCATCCGAGCGGCTC GCGCGGCTGGGTGGCAAGGA
Downstream 100 bases:
>100_bases AGCGGATCCGCGTCGTCGCGGCCGTCGTCCGGCGGGGCGACGCCATCCTCGTCACCCGCCGTCCCGACCGCGACGGCCTG CGCGGCCAGTGGGAGTTCCC
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTALALALALAAAPGVSSRLPAGPLDLYRIAWMRPVVGPQAMESRPLEPGGVAVDPETGYAVFGTRDGWVHALRPDGSVA WELRTAGSFWAPPAIDHGVAYVGCTDGRLYALATATGKELWRYDAKEELGTRPAVADGTVFVMSLQDTLFAVDAKTGAWK WHHRREARAGFTVRGAAWPVARGGTVWAGYSDGWVAALDVANGATRWERTVAPAGDYLDVDAIQLDGKHLYATAFSGAVL AMDAATGDPVWAFRAPGAARLVLGRGAVIAVTSSSVHALDPAAGHVLWTAPLGGAPGGGAPVIAGPWVLVPAGQGGLRFL EASSGRTLRVLDPGTGISSTPGVGGERVYVLSNGGDLLALDLR
Sequences:
>Translated_363_residues MTALALALALAAAPGVSSRLPAGPLDLYRIAWMRPVVGPQAMESRPLEPGGVAVDPETGYAVFGTRDGWVHALRPDGSVA WELRTAGSFWAPPAIDHGVAYVGCTDGRLYALATATGKELWRYDAKEELGTRPAVADGTVFVMSLQDTLFAVDAKTGAWK WHHRREARAGFTVRGAAWPVARGGTVWAGYSDGWVAALDVANGATRWERTVAPAGDYLDVDAIQLDGKHLYATAFSGAVL AMDAATGDPVWAFRAPGAARLVLGRGAVIAVTSSSVHALDPAAGHVLWTAPLGGAPGGGAPVIAGPWVLVPAGQGGLRFL EASSGRTLRVLDPGTGISSTPGVGGERVYVLSNGGDLLALDLR >Mature_362_residues TALALALALAAAPGVSSRLPAGPLDLYRIAWMRPVVGPQAMESRPLEPGGVAVDPETGYAVFGTRDGWVHALRPDGSVAW ELRTAGSFWAPPAIDHGVAYVGCTDGRLYALATATGKELWRYDAKEELGTRPAVADGTVFVMSLQDTLFAVDAKTGAWKW HHRREARAGFTVRGAAWPVARGGTVWAGYSDGWVAALDVANGATRWERTVAPAGDYLDVDAIQLDGKHLYATAFSGAVLA MDAATGDPVWAFRAPGAARLVLGRGAVIAVTSSSVHALDPAAGHVLWTAPLGGAPGGGAPVIAGPWVLVPAGQGGLRFLE ASSGRTLRVLDPGTGISSTPGVGGERVYVLSNGGDLLALDLR
Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP232 [H]
Homologues:
Organism=Escherichia coli, GI1788859, Length=282, Percent_Identity=25.886524822695, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017687 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 37602; Mature: 37471
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALALALALAAAPGVSSRLPAGPLDLYRIAWMRPVVGPQAMESRPLEPGGVAVDPETGY CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCE AVFGTRDGWVHALRPDGSVAWELRTAGSFWAPPAIDHGVAYVGCTDGRLYALATATGKEL EEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHH WRYDAKEELGTRPAVADGTVFVMSLQDTLFAVDAKTGAWKWHHRREARAGFTVRGAAWPV HHCCCHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEHHHHHHCCCEEEECCCCCC ARGGTVWAGYSDGWVAALDVANGATRWERTVAPAGDYLDVDAIQLDGKHLYATAFSGAVL CCCCEEEECCCCCEEEEEEECCCCCHHHEEECCCCCEEEEEEEEECCCEEEEEEECCEEE AMDAATGDPVWAFRAPGAARLVLGRGAVIAVTSSSVHALDPAAGHVLWTAPLGGAPGGGA EEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCEEEECCCCCCEEEECCCCCCCCCCC PVIAGPWVLVPAGQGGLRFLEASSGRTLRVLDPGTGISSTPGVGGERVYVLSNGGDLLAL CEEECCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEE DLR ECC >Mature Secondary Structure TALALALALAAAPGVSSRLPAGPLDLYRIAWMRPVVGPQAMESRPLEPGGVAVDPETGY HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCE AVFGTRDGWVHALRPDGSVAWELRTAGSFWAPPAIDHGVAYVGCTDGRLYALATATGKEL EEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHH WRYDAKEELGTRPAVADGTVFVMSLQDTLFAVDAKTGAWKWHHRREARAGFTVRGAAWPV HHCCCHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEHHHHHHCCCEEEECCCCCC ARGGTVWAGYSDGWVAALDVANGATRWERTVAPAGDYLDVDAIQLDGKHLYATAFSGAVL CCCCEEEECCCCCEEEEEEECCCCCHHHEEECCCCCEEEEEEEEECCCEEEEEEECCEEE AMDAATGDPVWAFRAPGAARLVLGRGAVIAVTSSSVHALDPAAGHVLWTAPLGGAPGGGA EEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCEEEECCCCCCEEEECCCCCCCCCCC PVIAGPWVLVPAGQGGLRFLEASSGRTLRVLDPGTGISSTPGVGGERVYVLSNGGDLLAL CEEECCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEE DLR ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]