| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917391
Identifier: 220917391
GI number: 220917391
Start: 2540515
End: 2541246
Strand: Reverse
Name: 220917391
Synonym: A2cp1_2291
Alternate gene names: NA
Gene position: 2541246-2540515 (Counterclockwise)
Preceding gene: 220917392
Following gene: 220917390
Centisome position: 50.53
GC content: 75.14
Gene sequence:
>732_bases ATGTCGAAGGACACCGTGATCACCCGGAAGGACATGAAGGAGCCGGACAAGTTCCAGGTGGCGGCCACGCAGGCCGCGAG CTGGGCCGCCTCCCGGAAGAAGCACCTCGTCATCGCGGGCGGCGCGGTGGTGGCGGCGCTGGTGATCGTGGCGGCCGTCT CGGCGCTGCGCGCGCAGCGCGAGCAGACCGCCGGCGCGGCCGCCTCGGCCCTGCTCGCGGCCATGGGCGGCGAGGTCTCG AGCGTGCCGCTCCCCGGCGTGCCCGGGCCGTTCTTCCCGACGCAGGAGGCCAAGCAGCGCGCGGTGATCGCCGAGGCCGA CAAGGTGATCGCGGCGCACGGCGGCACCGGCCCGGCGCTGGTGGCCGAGCTGGCCCGCGGCGACGCGCACTACAAGCTGG GCGACTGGGACGCCGCGCTCGCGTCCTACGAGCGCTACCTGAAGGACGCCCCCGCCGACGACTCGTTCCGCTTCGGCGCG CTGGAGGGCGTCGGCCTGGTCCGGGAGGCGAAGGGCGATCTCGCCGGCGCGGCGCAGGCGTACGAGCGGCTCGCCACCGA GGCGCCGAAGATGGCCGACCGCGCCGATCTGGAGCGGGCCCGCGTGCTCGCGGCTGCGGGGAAGGCGTCCGAGGCCAGGG CGCTGCTGGCCGGCTTCGCCGAGAAGCACAAGGACTCGCTGCTCACGCCCGAGGCATCCGAGCGGCTCGCGCGGCTGGGT GGCAAGGAGTGA
Upstream 100 bases:
>100_bases GGCCCGGCGGGGCGGGCTTTCGCTTGACGCCCCCCGGGTAGCCGCCTAGATTGGCCCGGTTTTCCTCACATTTTCGCCGA GCACGCACCCGAGAGGCGCC
Downstream 100 bases:
>100_bases CGGCGCTCGCGCTGGCGCTCGCGCTGGCGGCGGCGCCGGGCGTGTCGTCGCGCCTGCCGGCCGGCCCGCTGGACCTGTAC CGCATCGCCTGGATGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSKDTVITRKDMKEPDKFQVAATQAASWAASRKKHLVIAGGAVVAALVIVAAVSALRAQREQTAGAAASALLAAMGGEVS SVPLPGVPGPFFPTQEAKQRAVIAEADKVIAAHGGTGPALVAELARGDAHYKLGDWDAALASYERYLKDAPADDSFRFGA LEGVGLVREAKGDLAGAAQAYERLATEAPKMADRADLERARVLAAAGKASEARALLAGFAEKHKDSLLTPEASERLARLG GKE
Sequences:
>Translated_243_residues MSKDTVITRKDMKEPDKFQVAATQAASWAASRKKHLVIAGGAVVAALVIVAAVSALRAQREQTAGAAASALLAAMGGEVS SVPLPGVPGPFFPTQEAKQRAVIAEADKVIAAHGGTGPALVAELARGDAHYKLGDWDAALASYERYLKDAPADDSFRFGA LEGVGLVREAKGDLAGAAQAYERLATEAPKMADRADLERARVLAAAGKASEARALLAGFAEKHKDSLLTPEASERLARLG GKE >Mature_242_residues SKDTVITRKDMKEPDKFQVAATQAASWAASRKKHLVIAGGAVVAALVIVAAVSALRAQREQTAGAAASALLAAMGGEVSS VPLPGVPGPFFPTQEAKQRAVIAEADKVIAAHGGTGPALVAELARGDAHYKLGDWDAALASYERYLKDAPADDSFRFGAL EGVGLVREAKGDLAGAAQAYERLATEAPKMADRADLERARVLAAAGKASEARALLAGFAEKHKDSLLTPEASERLARLGG KE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25181; Mature: 25050
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDTVITRKDMKEPDKFQVAATQAASWAASRKKHLVIAGGAVVAALVIVAAVSALRAQR CCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH EQTAGAAASALLAAMGGEVSSVPLPGVPGPFFPTQEAKQRAVIAEADKVIAAHGGTGPAL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHH VAELARGDAHYKLGDWDAALASYERYLKDAPADDSFRFGALEGVGLVREAKGDLAGAAQA HHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCCEECCCHHCCHHHHHHHCHHHHHHHH YERLATEAPKMADRADLERARVLAAAGKASEARALLAGFAEKHKDSLLTPEASERLARLG HHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GKE CCC >Mature Secondary Structure SKDTVITRKDMKEPDKFQVAATQAASWAASRKKHLVIAGGAVVAALVIVAAVSALRAQR CCCCEEEHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH EQTAGAAASALLAAMGGEVSSVPLPGVPGPFFPTQEAKQRAVIAEADKVIAAHGGTGPAL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHH VAELARGDAHYKLGDWDAALASYERYLKDAPADDSFRFGALEGVGLVREAKGDLAGAAQA HHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCCEECCCHHCCHHHHHHHCHHHHHHHH YERLATEAPKMADRADLERARVLAAAGKASEARALLAGFAEKHKDSLLTPEASERLARLG HHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GKE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA